The gene/protein map for NC_010475 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077979

Identifier: 170077979

GI number: 170077979

Start: 1426148

End: 1426846

Strand: Reverse

Name: 170077979

Synonym: SYNPCC7002_A1365

Alternate gene names: NA

Gene position: 1426846-1426148 (Counterclockwise)

Preceding gene: 170077980

Following gene: 170077978

Centisome position: 47.43

GC content: 50.93

Gene sequence:

>699_bases
ATGTCTCAGTTTGAATTTCGCGTTGAAAATAATCCCTCCTATGCCTCGCTCATTGTGACCTTACCGCCCAACCAAACCCT
ACTCGTAGAGGCGGGGGCGATGGCGGCAATGGATGCCAACATTGAGATGAAGTCGAAGATGCGGGGGGGTTTGATGAAGG
GCATCGGGCGGATGTTCAGTGGAGAATCCCTATTTATCAGTGAATTTACCGCCAGAAATAGCGCCGGGGAACTCTATATC
TCGCCAGGGGTGCCGGGGGATGTGACCTACTACCATTTGGACGGTTCTAAGGGTTTGATGGTTCAGTCTTCGGGTTTTGT
CGCTTCTAGTCCCTCAGTGGATCTTGACACCAAATTCCAGGGGCTGAAGGGTTTCTTTACGGGGGAATCGATCTTTTTCC
TGCGGGCATCGGGCCAAGGGGATTTTTGGTTCAGTTCCTACGGGGCGATCATTGAAATTCCTGTAGAGGGGGATTATGTG
GTGGATACGGGCTACATTGTCGCCTTTGAGGATACGCTGCAATACAACGTGGAAATGATTGGGGGCTTATCTTTCCGGAG
CCTGCGCACAGGGATTCTCGGCGGAGAAGGCTTAGTTTGTCGTTTCAGTGGCAAGGGTAAGCTCTGGGTACAATCGCGGA
ATCTTTTCCCCCTGTTGAATTTCCTTTATCCGTTCCGCCCCGTGCCAAATAATAATTAA

Upstream 100 bases:

>100_bases
CCAAACCCATAATCCCGGAGCCTTTGGTTCCCTGGTTGGTTCCCAATTACCACCCCGTTAAGTTGTCCTTTGAAGCCAGT
GCTGAAAGTGCTTAAAAATT

Downstream 100 bases:

>100_bases
CTGCGTTTCTAGGAAAATTGATTAGCTGCTGTGCGGTGCGCCTTCGGGGTGATTACGGTATCCTGAAGGCAAATTCCATG
CACGCAACAAGAGCAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSQFEFRVENNPSYASLIVTLPPNQTLLVEAGAMAAMDANIEMKSKMRGGLMKGIGRMFSGESLFISEFTARNSAGELYI
SPGVPGDVTYYHLDGSKGLMVQSSGFVASSPSVDLDTKFQGLKGFFTGESIFFLRASGQGDFWFSSYGAIIEIPVEGDYV
VDTGYIVAFEDTLQYNVEMIGGLSFRSLRTGILGGEGLVCRFSGKGKLWVQSRNLFPLLNFLYPFRPVPNNN

Sequences:

>Translated_232_residues
MSQFEFRVENNPSYASLIVTLPPNQTLLVEAGAMAAMDANIEMKSKMRGGLMKGIGRMFSGESLFISEFTARNSAGELYI
SPGVPGDVTYYHLDGSKGLMVQSSGFVASSPSVDLDTKFQGLKGFFTGESIFFLRASGQGDFWFSSYGAIIEIPVEGDYV
VDTGYIVAFEDTLQYNVEMIGGLSFRSLRTGILGGEGLVCRFSGKGKLWVQSRNLFPLLNFLYPFRPVPNNN
>Mature_231_residues
SQFEFRVENNPSYASLIVTLPPNQTLLVEAGAMAAMDANIEMKSKMRGGLMKGIGRMFSGESLFISEFTARNSAGELYIS
PGVPGDVTYYHLDGSKGLMVQSSGFVASSPSVDLDTKFQGLKGFFTGESIFFLRASGQGDFWFSSYGAIIEIPVEGDYVV
DTGYIVAFEDTLQYNVEMIGGLSFRSLRTGILGGEGLVCRFSGKGKLWVQSRNLFPLLNFLYPFRPVPNNN

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 25395; Mature: 25264

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50920 SOLCAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFEFRVENNPSYASLIVTLPPNQTLLVEAGAMAAMDANIEMKSKMRGGLMKGIGRMFS
CCCEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEEECCCEEHHHHCCHHHHHHHHHHC
GESLFISEFTARNSAGELYISPGVPGDVTYYHLDGSKGLMVQSSGFVASSPSVDLDTKFQ
CCEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCEECCCCCCCCCCCC
GLKGFFTGESIFFLRASGQGDFWFSSYGAIIEIPVEGDYVVDTGYIVAFEDTLQYNVEMI
CCEEEECCCEEEEEEECCCCCEEEECCCCEEEEECCCCEEEECCEEEEEECCEEEEEEEE
GGLSFRSLRTGILGGEGLVCRFSGKGKLWVQSRNLFPLLNFLYPFRPVPNNN
ECCCHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SQFEFRVENNPSYASLIVTLPPNQTLLVEAGAMAAMDANIEMKSKMRGGLMKGIGRMFS
CCEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEEECCCEEHHHHCCHHHHHHHHHHC
GESLFISEFTARNSAGELYISPGVPGDVTYYHLDGSKGLMVQSSGFVASSPSVDLDTKFQ
CCEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCEECCCCCCCCCCCC
GLKGFFTGESIFFLRASGQGDFWFSSYGAIIEIPVEGDYVVDTGYIVAFEDTLQYNVEMI
CCEEEECCCEEEEEEECCCCCEEEECCCCEEEEECCCCEEEECCEEEEEECCEEEEEEEE
GGLSFRSLRTGILGGEGLVCRFSGKGKLWVQSRNLFPLLNFLYPFRPVPNNN
ECCCHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA