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The map label for this gene is 170077973

Identifier: 170077973

GI number: 170077973

Start: 1419457

End: 1420065

Strand: Direct

Name: 170077973

Synonym: SYNPCC7002_A1359

Alternate gene names: NA

Gene position: 1419457-1420065 (Clockwise)

Preceding gene: 170077972

Following gene: 170077976

Centisome position: 47.19

GC content: 49.92

Gene sequence:

>609_bases
ATGACCCACCAGCGCGATCCCGAAGCCCAGGCTGTTGCCCAGGAATTAAAGCAGCAAATCATGATTTTGGGTTTGTTTCT
TGCGAGTTTTTGGGGCCTAGAAATTAGTGATCAGTTTGTTTTTCAAAATCTTTGGCGGGGTGGCCTAGATGTATTCGGCA
TTCTGCCCCGACAACTGCTGGGACTCAGGGGAATCTTCTTTGCACCCTTTCTCCATGGTGGTTTTCAGCACCTCGTCACC
AACTCAATCCCCTTTGCGCTGTTGGGCTGGCTCGTGATGCTAGACCGCATCCGTGACTTTTTTACGGTTACTTTAATAAC
AATGCTTGTCGGTGGCCTGGGAGTATGGCTCATTGGTGCCCAAAATTCTGTGCATATTGGGGCCAGTATTTTAATTTTTG
GGTATTTGGGATTTCTGTTGTTTCGGGGCTACTTTCGGCGAGATATCCCATCCATTGCCGTTTCGCTCTTGGTATTTTTT
CTCTATGGTGGGGTGCTTTGGAGTGTTCTACCGACGACCCCAGGGGTGTCTTGGGAGGGGCATTTATTCGGACTTATCGG
CGGGGCGATCGCCGCAAAATATCTCAACCCCCGTTCCCTTCGCCGCTAA

Upstream 100 bases:

>100_bases
TGGTTGCACTTGTTTCGCTTTTCGTGAATGCAGTCGTCCCATTGATCGCGAAACTTGTTAACGTGGGAAGGAATATTACA
ACTAACTTTTCGCCGAATCC

Downstream 100 bases:

>100_bases
TGGATTGCACCAGTTTGTGCTTGCCCTAGTGCCGTTATTCTGGGTCATTTTCTCCAAGCACCTGTTCCGTAACGGTTGCT
GATTCTGTCATGTCCAAGGG

Product: rhomboid family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTHQRDPEAQAVAQELKQQIMILGLFLASFWGLEISDQFVFQNLWRGGLDVFGILPRQLLGLRGIFFAPFLHGGFQHLVT
NSIPFALLGWLVMLDRIRDFFTVTLITMLVGGLGVWLIGAQNSVHIGASILIFGYLGFLLFRGYFRRDIPSIAVSLLVFF
LYGGVLWSVLPTTPGVSWEGHLFGLIGGAIAAKYLNPRSLRR

Sequences:

>Translated_202_residues
MTHQRDPEAQAVAQELKQQIMILGLFLASFWGLEISDQFVFQNLWRGGLDVFGILPRQLLGLRGIFFAPFLHGGFQHLVT
NSIPFALLGWLVMLDRIRDFFTVTLITMLVGGLGVWLIGAQNSVHIGASILIFGYLGFLLFRGYFRRDIPSIAVSLLVFF
LYGGVLWSVLPTTPGVSWEGHLFGLIGGAIAAKYLNPRSLRR
>Mature_201_residues
THQRDPEAQAVAQELKQQIMILGLFLASFWGLEISDQFVFQNLWRGGLDVFGILPRQLLGLRGIFFAPFLHGGFQHLVTN
SIPFALLGWLVMLDRIRDFFTVTLITMLVGGLGVWLIGAQNSVHIGASILIFGYLGFLLFRGYFRRDIPSIAVSLLVFFL
YGGVLWSVLPTTPGVSWEGHLFGLIGGAIAAKYLNPRSLRR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1171 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022764 [H]

Pfam domain/function: PF01694 Rhomboid [H]

EC number: NA

Molecular weight: Translated: 22551; Mature: 22420

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHQRDPEAQAVAQELKQQIMILGLFLASFWGLEISDQFVFQNLWRGGLDVFGILPRQLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GLRGIFFAPFLHGGFQHLVTNSIPFALLGWLVMLDRIRDFFTVTLITMLVGGLGVWLIGA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
QNSVHIGASILIFGYLGFLLFRGYFRRDIPSIAVSLLVFFLYGGVLWSVLPTTPGVSWEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HLFGLIGGAIAAKYLNPRSLRR
HHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
THQRDPEAQAVAQELKQQIMILGLFLASFWGLEISDQFVFQNLWRGGLDVFGILPRQLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GLRGIFFAPFLHGGFQHLVTNSIPFALLGWLVMLDRIRDFFTVTLITMLVGGLGVWLIGA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
QNSVHIGASILIFGYLGFLLFRGYFRRDIPSIAVSLLVFFLYGGVLWSVLPTTPGVSWEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HLFGLIGGAIAAKYLNPRSLRR
HHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]