Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077972

Identifier: 170077972

GI number: 170077972

Start: 1418877

End: 1419383

Strand: Direct

Name: 170077972

Synonym: SYNPCC7002_A1358

Alternate gene names: NA

Gene position: 1418877-1419383 (Clockwise)

Preceding gene: 170077969

Following gene: 170077973

Centisome position: 47.17

GC content: 55.42

Gene sequence:

>507_bases
ATGAATTTTCTCCGGAAAAAGCAATTACAGCAACGCCTGCGCCAGGATCCCTACTACCGCCTCCGTTCCTTCGAAGAAGT
CGCCCTCGCTGCGGCCATAGGCATCAAGATCGATGTTAACCAAGCCACTGTCGATGATTGGCTCCGTCTGCCGGGTATTT
CCATTCACCAGGGGCGATCGCTCGTGCAGCTCACCAGCCAGGGGGTGCAATTCTATAGCCTCGACGATGTGGCAGCGGCC
CTAGGGGTTCCCCGTCAACGTCTCCAGCCCTTGGCCGCGATCCTCAGTTTTGCTTACTATGCCCCAGAGCTAGCCCCAGT
ACAAATTAACCTAAACCGCGCTGACCTTGGGGCGCTAGTCGATTTTGGCGTCGAAGTTCCCCTGGCCCAACGGATCATTA
CAGAGCGGCAACGGGGCCAGTATCGTGATTTTGCAGATTTACAGAGTCGGTTGCAGCTTTCTGGGGCACAGATCATGCAG
TGGTTGCACTTGTTTCGCTTTTCGTGA

Upstream 100 bases:

>100_bases
TCTATCGGCCTATTGTAAAGGCTAAGGGATCTTTTCGGCAATGCTAAAAAATAGAGGCGATCGCCTGTAGAGTAAACAAG
ATTGAGGCCCGCAAAAGACT

Downstream 100 bases:

>100_bases
ATGCAGTCGTCCCATTGATCGCGAAACTTGTTAACGTGGGAAGGAATATTACAACTAACTTTTCGCCGAATCCATGACCC
ACCAGCGCGATCCCGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA
LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ
WLHLFRFS

Sequences:

>Translated_168_residues
MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA
LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ
WLHLFRFS
>Mature_168_residues
MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA
LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ
WLHLFRFS

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19152; Mature: 19152

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCH
LVQLTSQGVQFYSLDDVAAALGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALV
HHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
DFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQWLHLFRFS
HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCH
LVQLTSQGVQFYSLDDVAAALGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALV
HHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
DFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQWLHLFRFS
HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA