| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077972
Identifier: 170077972
GI number: 170077972
Start: 1418877
End: 1419383
Strand: Direct
Name: 170077972
Synonym: SYNPCC7002_A1358
Alternate gene names: NA
Gene position: 1418877-1419383 (Clockwise)
Preceding gene: 170077969
Following gene: 170077973
Centisome position: 47.17
GC content: 55.42
Gene sequence:
>507_bases ATGAATTTTCTCCGGAAAAAGCAATTACAGCAACGCCTGCGCCAGGATCCCTACTACCGCCTCCGTTCCTTCGAAGAAGT CGCCCTCGCTGCGGCCATAGGCATCAAGATCGATGTTAACCAAGCCACTGTCGATGATTGGCTCCGTCTGCCGGGTATTT CCATTCACCAGGGGCGATCGCTCGTGCAGCTCACCAGCCAGGGGGTGCAATTCTATAGCCTCGACGATGTGGCAGCGGCC CTAGGGGTTCCCCGTCAACGTCTCCAGCCCTTGGCCGCGATCCTCAGTTTTGCTTACTATGCCCCAGAGCTAGCCCCAGT ACAAATTAACCTAAACCGCGCTGACCTTGGGGCGCTAGTCGATTTTGGCGTCGAAGTTCCCCTGGCCCAACGGATCATTA CAGAGCGGCAACGGGGCCAGTATCGTGATTTTGCAGATTTACAGAGTCGGTTGCAGCTTTCTGGGGCACAGATCATGCAG TGGTTGCACTTGTTTCGCTTTTCGTGA
Upstream 100 bases:
>100_bases TCTATCGGCCTATTGTAAAGGCTAAGGGATCTTTTCGGCAATGCTAAAAAATAGAGGCGATCGCCTGTAGAGTAAACAAG ATTGAGGCCCGCAAAAGACT
Downstream 100 bases:
>100_bases ATGCAGTCGTCCCATTGATCGCGAAACTTGTTAACGTGGGAAGGAATATTACAACTAACTTTTCGCCGAATCCATGACCC ACCAGCGCGATCCCGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ WLHLFRFS
Sequences:
>Translated_168_residues MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ WLHLFRFS >Mature_168_residues MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRSLVQLTSQGVQFYSLDDVAAA LGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALVDFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQ WLHLFRFS
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19152; Mature: 19152
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRS CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCH LVQLTSQGVQFYSLDDVAAALGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALV HHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH DFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQWLHLFRFS HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFLRKKQLQQRLRQDPYYRLRSFEEVALAAAIGIKIDVNQATVDDWLRLPGISIHQGRS CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCH LVQLTSQGVQFYSLDDVAAALGVPRQRLQPLAAILSFAYYAPELAPVQINLNRADLGALV HHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH DFGVEVPLAQRIITERQRGQYRDFADLQSRLQLSGAQIMQWLHLFRFS HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA