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The map label for this gene is srpC [H]

Identifier: 170077935

GI number: 170077935

Start: 1374890

End: 1376029

Strand: Reverse

Name: srpC [H]

Synonym: SYNPCC7002_A1320

Alternate gene names: 170077935

Gene position: 1376029-1374890 (Counterclockwise)

Preceding gene: 170077940

Following gene: 170077934

Centisome position: 45.74

GC content: 50.79

Gene sequence:

>1140_bases
ATGGCGCAATGGTCTGAACTGCGGGAGATTTCTCGATTATTTTTGCGATTAGGTTTTACGGCGTTTGGCGGCCCTGTGGC
TCACATTGCGATGATGCACGACGAGGTGGTAAAAAAACGCCACTGGCTTACGGAACAGGAATTTCTCGACATTCTCGGCG
CAACAAATTTAATTCCTGGCCCCAATTCTACGGAAATGGCAATCCACCTCAGTTTTAAGCGCGCCGGTTGGTGGGGCTTG
CTCATGGGGGGCCTTAGTTTTACGGCTCCGGCGGTGGGTTTAATGCTGCTCTGTGCGATCGCCTATCAGCAGTTTGGCAC
AACACCCCAGGGGACATGGCTGCTCTATGGGGTCAAACCAGTGGCGATCGCCATTATTGCCCAGGCCCTATGGAAGCTTG
GGAAAAAGGCAATTAAAGATAGATTTGGGATCGGTTTAGCAGTATTTAATGTGGTGCTATCCCTGGTCGGTCTCCATGAA
CTGTGGTTGTTGTTTCTGAGTGGCTTCATTGGCCTAGGGAAAAAACTAGGGGGCCAATGGCTAAAAACAAAACAAACCCG
TAGCATTGTTCCCGCTCCGTTGCTGTTGCTATTAAATGGCACCCCTGCAAATTTCAGTTTGGGCTGGCTTTTTTTAATGT
TTCTTAAGGTGGGGGCGGTGCTCTATGGCAGTGGCTACGTCCTCGTGGCTTTTTTGCGGGCAGATTTTGTGGAGCGCCTC
GGTTGGCTGACGGATCAACAACTCCTCGATGCGATCGCCATTGGTCAAATCACCCCAGGGCCTTTATCTTCGACGGCGAC
TTTCATCGGCTATCTGTTGGGGGGAGTACCGGGGGCTGGGGTTGCCACCTTGGGAATGTTCCTCCCTTCTTTTCTCTTTG
TGGCGATTCTCAATCCAATTTTGCCGAAACTGCTCCAGGCCAAATCATTCCGGGCTTTTCTCGATGGGGTGAATATTGGT
GCGCTGAGTCTCATGACCGTTGTCACCGTGTTTCTGGCGCAATCTTCTTTAGTTGATCCTCTGACCATTGGGGTGGCGAT
CGCCGCTTTATTTCTCTTGATCAAATACAAAATCAATTCCCTCTGGCTAGTGCTGGGTGGGATGGCGATCGGTTTACTGT
CTCCTTTTTTGCCAAGCTAG

Upstream 100 bases:

>100_bases
GTGATGCAATAGTCATCTTTCACTTATTGTGGCACGAATTTATTAGGGGTTGTGGCCTAGGCAGAGGGGGAAATGATTAA
ACATTTCGATAACATTCATC

Downstream 100 bases:

>100_bases
TGGGTTTGAATTTAGAGGAGTCAAGGTAGACTAAAATCACATTCATCTGCGTATCAGTCCAAACCATGCAACTCTCGCCC
CAGGAAAAAGACAAGCTGCT

Product: chromate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAQWSELREISRLFLRLGFTAFGGPVAHIAMMHDEVVKKRHWLTEQEFLDILGATNLIPGPNSTEMAIHLSFKRAGWWGL
LMGGLSFTAPAVGLMLLCAIAYQQFGTTPQGTWLLYGVKPVAIAIIAQALWKLGKKAIKDRFGIGLAVFNVVLSLVGLHE
LWLLFLSGFIGLGKKLGGQWLKTKQTRSIVPAPLLLLLNGTPANFSLGWLFLMFLKVGAVLYGSGYVLVAFLRADFVERL
GWLTDQQLLDAIAIGQITPGPLSSTATFIGYLLGGVPGAGVATLGMFLPSFLFVAILNPILPKLLQAKSFRAFLDGVNIG
ALSLMTVVTVFLAQSSLVDPLTIGVAIAALFLLIKYKINSLWLVLGGMAIGLLSPFLPS

Sequences:

>Translated_379_residues
MAQWSELREISRLFLRLGFTAFGGPVAHIAMMHDEVVKKRHWLTEQEFLDILGATNLIPGPNSTEMAIHLSFKRAGWWGL
LMGGLSFTAPAVGLMLLCAIAYQQFGTTPQGTWLLYGVKPVAIAIIAQALWKLGKKAIKDRFGIGLAVFNVVLSLVGLHE
LWLLFLSGFIGLGKKLGGQWLKTKQTRSIVPAPLLLLLNGTPANFSLGWLFLMFLKVGAVLYGSGYVLVAFLRADFVERL
GWLTDQQLLDAIAIGQITPGPLSSTATFIGYLLGGVPGAGVATLGMFLPSFLFVAILNPILPKLLQAKSFRAFLDGVNIG
ALSLMTVVTVFLAQSSLVDPLTIGVAIAALFLLIKYKINSLWLVLGGMAIGLLSPFLPS
>Mature_378_residues
AQWSELREISRLFLRLGFTAFGGPVAHIAMMHDEVVKKRHWLTEQEFLDILGATNLIPGPNSTEMAIHLSFKRAGWWGLL
MGGLSFTAPAVGLMLLCAIAYQQFGTTPQGTWLLYGVKPVAIAIIAQALWKLGKKAIKDRFGIGLAVFNVVLSLVGLHEL
WLLFLSGFIGLGKKLGGQWLKTKQTRSIVPAPLLLLLNGTPANFSLGWLFLMFLKVGAVLYGSGYVLVAFLRADFVERLG
WLTDQQLLDAIAIGQITPGPLSSTATFIGYLLGGVPGAGVATLGMFLPSFLFVAILNPILPKLLQAKSFRAFLDGVNIGA
LSLMTVVTVFLAQSSLVDPLTIGVAIAALFLLIKYKINSLWLVLGGMAIGLLSPFLPS

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 40906; Mature: 40774

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQWSELREISRLFLRLGFTAFGGPVAHIAMMHDEVVKKRHWLTEQEFLDILGATNLIPG
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PNSTEMAIHLSFKRAGWWGLLMGGLSFTAPAVGLMLLCAIAYQQFGTTPQGTWLLYGVKP
CCCCCEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH
VAIAIIAQALWKLGKKAIKDRFGIGLAVFNVVLSLVGLHELWLLFLSGFIGLGKKLGGQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKTKQTRSIVPAPLLLLLNGTPANFSLGWLFLMFLKVGAVLYGSGYVLVAFLRADFVERL
HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GWLTDQQLLDAIAIGQITPGPLSSTATFIGYLLGGVPGAGVATLGMFLPSFLFVAILNPI
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LPKLLQAKSFRAFLDGVNIGALSLMTVVTVFLAQSSLVDPLTIGVAIAALFLLIKYKINS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LWLVLGGMAIGLLSPFLPS
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AQWSELREISRLFLRLGFTAFGGPVAHIAMMHDEVVKKRHWLTEQEFLDILGATNLIPG
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PNSTEMAIHLSFKRAGWWGLLMGGLSFTAPAVGLMLLCAIAYQQFGTTPQGTWLLYGVKP
CCCCCEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH
VAIAIIAQALWKLGKKAIKDRFGIGLAVFNVVLSLVGLHELWLLFLSGFIGLGKKLGGQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKTKQTRSIVPAPLLLLLNGTPANFSLGWLFLMFLKVGAVLYGSGYVLVAFLRADFVERL
HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GWLTDQQLLDAIAIGQITPGPLSSTATFIGYLLGGVPGAGVATLGMFLPSFLFVAILNPI
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LPKLLQAKSFRAFLDGVNIGALSLMTVVTVFLAQSSLVDPLTIGVAIAALFLLIKYKINS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LWLVLGGMAIGLLSPFLPS
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]