Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077905

Identifier: 170077905

GI number: 170077905

Start: 1341085

End: 1341810

Strand: Reverse

Name: 170077905

Synonym: SYNPCC7002_A1290

Alternate gene names: NA

Gene position: 1341810-1341085 (Counterclockwise)

Preceding gene: 170077906

Following gene: 170077903

Centisome position: 44.61

GC content: 48.48

Gene sequence:

>726_bases
ATGTACCAAACCAATGATGTGCTGTGGTTAAACGTTAATCCCGCTTTTAAATCCTTTGATATACCTCTCCTGAAGGTATT
AGCAAAAAAACACTCAGTTCACTATTGGGAATATCAGCAATCGATGGACGAAGCCCGTTCCCTTGATGATGTTTTAGTCT
TGCTTCATGATTACCTCAAGCAGTGCGATCGCCCCGTTCATTTACTAGGCCATGGCACTGGCGGATTAGTGGCCTTGCTC
TACGGCGATCGCCACCCAGAACGGGTGAAATCCCTGACCTTGCTGTCGGTAGGGGCTTATCCGGCGGTGGATTGGCAGGC
CCATTATTATGCCCAGTTGCGCCTATTACCTTGTCCGAGAAGTATTCTCCTAAAGCAGACCGTTTACAATCTGTTTGGAA
TTCAATCGCCAGCCACCGTTTATCAACTGCGGGATGTGCTCGAAAGCGACCTCAAAACGGCTCTTCCCCTCCATACCCTT
TGTCGAAATCGATCTTTACCACCCCGTTCGGTCTCAATGCCTTTGTTGGTTTGTGGGGGCAGTGATGATGTGGTGATTGA
TCAGAAACTTCAAACAGATTGGCAGCCTTGGCTCAAGCCGGAGGATACCCTGTGGCAATGCCCCCAAGGTCGGTATTTTT
TCCATTATTTTCAGCCCGAAAAAGTGGCCCATGAAATTTCGACCTTCCTGCAACTCAAGCAATCGGCCCTAACAGCGACA
GTTTAA

Upstream 100 bases:

>100_bases
TCTTCCTCTGGTGGAATCAAAAGGAATTCGGTAAAGGGATTTTTCCAAATAAATTTTTTTTAATCAATAACAACAATAAA
AAATTATTCTAAAAATAAAA

Downstream 100 bases:

>100_bases
AAATAGTGACCAGATTTCTAGTGAATGTTCAATTGGCGATCGCCTAATTCTTTTCAGAAGGTTGAATGTTCCAAGAAAGT
TGGAGTTGATGCTGGCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MYQTNDVLWLNVNPAFKSFDIPLLKVLAKKHSVHYWEYQQSMDEARSLDDVLVLLHDYLKQCDRPVHLLGHGTGGLVALL
YGDRHPERVKSLTLLSVGAYPAVDWQAHYYAQLRLLPCPRSILLKQTVYNLFGIQSPATVYQLRDVLESDLKTALPLHTL
CRNRSLPPRSVSMPLLVCGGSDDVVIDQKLQTDWQPWLKPEDTLWQCPQGRYFFHYFQPEKVAHEISTFLQLKQSALTAT
V

Sequences:

>Translated_241_residues
MYQTNDVLWLNVNPAFKSFDIPLLKVLAKKHSVHYWEYQQSMDEARSLDDVLVLLHDYLKQCDRPVHLLGHGTGGLVALL
YGDRHPERVKSLTLLSVGAYPAVDWQAHYYAQLRLLPCPRSILLKQTVYNLFGIQSPATVYQLRDVLESDLKTALPLHTL
CRNRSLPPRSVSMPLLVCGGSDDVVIDQKLQTDWQPWLKPEDTLWQCPQGRYFFHYFQPEKVAHEISTFLQLKQSALTAT
V
>Mature_241_residues
MYQTNDVLWLNVNPAFKSFDIPLLKVLAKKHSVHYWEYQQSMDEARSLDDVLVLLHDYLKQCDRPVHLLGHGTGGLVALL
YGDRHPERVKSLTLLSVGAYPAVDWQAHYYAQLRLLPCPRSILLKQTVYNLFGIQSPATVYQLRDVLESDLKTALPLHTL
CRNRSLPPRSVSMPLLVCGGSDDVVIDQKLQTDWQPWLKPEDTLWQCPQGRYFFHYFQPEKVAHEISTFLQLKQSALTAT
V

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Anabaena PCC 7120 alr2406 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27684; Mature: 27684

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQTNDVLWLNVNPAFKSFDIPLLKVLAKKHSVHYWEYQQSMDEARSLDDVLVLLHDYLK
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QCDRPVHLLGHGTGGLVALLYGDRHPERVKSLTLLSVGAYPAVDWQAHYYAQLRLLPCPR
HCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCH
SILLKQTVYNLFGIQSPATVYQLRDVLESDLKTALPLHTLCRNRSLPPRSVSMPLLVCGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
SDDVVIDQKLQTDWQPWLKPEDTLWQCPQGRYFFHYFQPEKVAHEISTFLQLKQSALTAT
CCCEEECCHHCCCCCCCCCCCCHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCC
V
C
>Mature Secondary Structure
MYQTNDVLWLNVNPAFKSFDIPLLKVLAKKHSVHYWEYQQSMDEARSLDDVLVLLHDYLK
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QCDRPVHLLGHGTGGLVALLYGDRHPERVKSLTLLSVGAYPAVDWQAHYYAQLRLLPCPR
HCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCH
SILLKQTVYNLFGIQSPATVYQLRDVLESDLKTALPLHTLCRNRSLPPRSVSMPLLVCGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
SDDVVIDQKLQTDWQPWLKPEDTLWQCPQGRYFFHYFQPEKVAHEISTFLQLKQSALTAT
CCCEEECCHHCCCCCCCCCCCCHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]