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The map label for this gene is 170077903

Identifier: 170077903

GI number: 170077903

Start: 1339269

End: 1339598

Strand: Reverse

Name: 170077903

Synonym: SYNPCC7002_A1288

Alternate gene names: NA

Gene position: 1339598-1339269 (Counterclockwise)

Preceding gene: 170077905

Following gene: 170077902

Centisome position: 44.53

GC content: 38.79

Gene sequence:

>330_bases
ATGGATAACAAAATTGCAGTCTTTCACCCCACGGGCATTTTTGATAATATTAAATCCCTTGAGTTTAAAGATGATTTACT
CAAAAGTATTATCGAGGAAAAAAAAGAAGTTGTTGTCCTTGATTTTGCTGGAATCACATTTATGGACAGTGCCGGCCTCG
GATCATTGGTTTTATTATTAAAAACGGTGCGCTCCCACGGGGCGAAAATGATTTTATGTAACGTCAATGAACAGGTACAA
ATGCTGTTTGAGTTGACCAATATGAACCGTGTGTTTGAAATTTTTGCGACCCAAGCAGACTTCTTTGAACAGCAGGCAGC
GCAATCCTAA

Upstream 100 bases:

>100_bases
TCACTGCGCTTGAGGACAACGCCTCACCTTCTTGACCATCAATATTGATTTAAAATTTTTACCTAGTTTTTGATTCTTTT
TTAACGATTCTGCGTTCATT

Downstream 100 bases:

>100_bases
ACAAGCCCCAAAAAGCCGAAGCGATCGCCGTAATCTTTTATTGGTTTTTTTATTGATTTTGCGGCCCCGTAAAGAACTGT
AATACATTTAATGAACCCCT

Product: anti-anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEEKKEVVVLDFAGITFMDSAGLGSLVLLLKTVRSHGAKMILCNVNEQVQ
MLFELTNMNRVFEIFATQADFFEQQAAQS

Sequences:

>Translated_109_residues
MDNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEEKKEVVVLDFAGITFMDSAGLGSLVLLLKTVRSHGAKMILCNVNEQVQ
MLFELTNMNRVFEIFATQADFFEQQAAQS
>Mature_109_residues
MDNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEEKKEVVVLDFAGITFMDSAGLGSLVLLLKTVRSHGAKMILCNVNEQVQ
MLFELTNMNRVFEIFATQADFFEQQAAQS

Specific function: In the phosphorylated form it could act as an anti-anti- sigma factor that counteracts an anti-sigma factor and thus releases a sigma factor from inhibition [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12287; Mature: 12287

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEEKKEVVVLDFAGITFMDSAGLGSLVLLL
CCCCEEEEECCCCHHCHHCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHH
KTVRSHGAKMILCNVNEQVQMLFELTNMNRVFEIFATQADFFEQQAAQS
HHHHHCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEEKKEVVVLDFAGITFMDSAGLGSLVLLL
CCCCEEEEECCCCHHCHHCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHH
KTVRSHGAKMILCNVNEQVQMLFELTNMNRVFEIFATQADFFEQQAAQS
HHHHHCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]