| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077887
Identifier: 170077887
GI number: 170077887
Start: 1318179
End: 1318607
Strand: Direct
Name: 170077887
Synonym: SYNPCC7002_A1272
Alternate gene names: NA
Gene position: 1318179-1318607 (Clockwise)
Preceding gene: 170077886
Following gene: 170077891
Centisome position: 43.82
GC content: 51.05
Gene sequence:
>429_bases GTGTTCATGTACGGCTTCTCCCCTCCACAATCACCCCGGCAACAGACCCCCATTTCTCTCCAGAAACGTCGCCATAAGCA AGATCAAAAAAGCGCTGGCCCATTAACAGCAGCAAATAAGCAGCATCGGTTCGCCTGCTGGGAATTGGCGGCGCAGATTT CTGTAAATTGTCTCCTTGGTGGGGTGGCGATCGCCTCCATTGCCCAATTGTTACCGGCCCAACTATCCCAACAGCAGCAG TTATCTGTTCTCAAGGGCGAAGTCACCGAAGCAGAACAACGGGTCGCCAAACTACGCCAAGAATTTAACCGTCACTTCGA TGCCTACGGGAGCCATCGACTAATGCAAGAGTACACCATAAAAGTCGATCCCAAACAACAGCGCATTATCTGGGTAGATC CGGCCCAGGCTCAAAATAGCGAAAATTAA
Upstream 100 bases:
>100_bases ATTTTTTCTAAAAAGGCTTGTTATAAGCATTATCAATCAAAGAAAAATGCTTCGATAACTTCAGGTTACGCGATTTCTTG TTTTTTTAGTGTTGGATCCT
Downstream 100 bases:
>100_bases TTTTTCTAAGAGCTTGGCTATCAGCTAAGCATTTTCTCGAATTTTTTTAATGCTCTAAATCCGTAAACAAAAAAGGGAGT CATTATGGCTCCCTTTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN
Sequences:
>Translated_142_residues MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN >Mature_142_residues MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16126; Mature: 16126
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVAIASIAQLLPAQLSQQQQLSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEE KVDPKQQRIIWVDPAQAQNSEN EECCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVAIASIAQLLPAQLSQQQQLSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEE KVDPKQQRIIWVDPAQAQNSEN EECCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA