| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077873
Identifier: 170077873
GI number: 170077873
Start: 1299179
End: 1299526
Strand: Direct
Name: 170077873
Synonym: SYNPCC7002_A1257
Alternate gene names: NA
Gene position: 1299179-1299526 (Clockwise)
Preceding gene: 170077871
Following gene: 170077874
Centisome position: 43.19
GC content: 46.26
Gene sequence:
>348_bases ATGGCGCGTTATACTTGCTCCTACTTCGTTGGACTCTCCGAACCAGAGATGCTCGCTTCCCTCAGGGATATCATCCAGGA ATGCGACCTCAACCTCACCTATGAGACGGGAGGTTACATCATGGCCAAAGAAAAACCCGGCAATGTTTCTTTCACCAAAC TTGTGGAGCTTGAAGTCCTATTTGACCGCAACAAAGTTCAAGATGGCAAACTGCAAGTGGATTTTGTGGCGAAAAATCAA GAACTCCCCCTCCATACCGATAACCATTGTCGGTCGATCTTTGAACAGATTTTGAAAACCGTGAACGCCCAACAGCCCTG GGAATTAGAAACAAATAACCTCGATTAA
Upstream 100 bases:
>100_bases GGGCTGACCAAGAACCTGATCGAGAGAAATCATTCGGTTAGGGGCCTCCCGTTCGGTAATATAAAAAAGAATGCTTCAGC ATGGTTGAAAGATATTTTTT
Downstream 100 bases:
>100_bases TCCCTGATTTTCCCCCAGGCTTTTGTTAAAAAAGTCCCGCTTTTCCCGACCCAGGCCATCAACAAACCGATGGGAGTATG AGAAGATAGGGGCACAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MARYTCSYFVGLSEPEMLASLRDIIQECDLNLTYETGGYIMAKEKPGNVSFTKLVELEVLFDRNKVQDGKLQVDFVAKNQ ELPLHTDNHCRSIFEQILKTVNAQQPWELETNNLD
Sequences:
>Translated_115_residues MARYTCSYFVGLSEPEMLASLRDIIQECDLNLTYETGGYIMAKEKPGNVSFTKLVELEVLFDRNKVQDGKLQVDFVAKNQ ELPLHTDNHCRSIFEQILKTVNAQQPWELETNNLD >Mature_114_residues ARYTCSYFVGLSEPEMLASLRDIIQECDLNLTYETGGYIMAKEKPGNVSFTKLVELEVLFDRNKVQDGKLQVDFVAKNQE LPLHTDNHCRSIFEQILKTVNAQQPWELETNNLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13243; Mature: 13112
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYTCSYFVGLSEPEMLASLRDIIQECDLNLTYETGGYIMAKEKPGNVSFTKLVELEVL CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEHEEEEEEE FDRNKVQDGKLQVDFVAKNQELPLHTDNHCRSIFEQILKTVNAQQPWELETNNLD ECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ARYTCSYFVGLSEPEMLASLRDIIQECDLNLTYETGGYIMAKEKPGNVSFTKLVELEVL CEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEHEEEEEEE FDRNKVQDGKLQVDFVAKNQELPLHTDNHCRSIFEQILKTVNAQQPWELETNNLD ECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA