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The map label for this gene is holB [H]

Identifier: 170077872

GI number: 170077872

Start: 1298158

End: 1299111

Strand: Reverse

Name: holB [H]

Synonym: SYNPCC7002_A1256

Alternate gene names: 170077872

Gene position: 1299111-1298158 (Counterclockwise)

Preceding gene: 170077877

Following gene: 170077869

Centisome position: 43.19

GC content: 52.62

Gene sequence:

>954_bases
ATGATTTCTCTCGATCAGGTTCTTGGTCAGCCCCAAGCCGTCTCACTCTTGCGTCAGGCGATCGCCCAGGATCGTCTGGC
TCCTGCCTACCTATTTGCGGGGCCAGAGGGCATTGGTCGCAGTTTGACAGCCAGGGGGTTTACGACGGCCCTTATGACCC
AGGAAGTACCAGAAGCAGCCCAACGTCTGATTCGTTATAAGCTCCTAAAAAATAATCACCCCGATTTGCTGTGGGTAGAA
CCCACCTACCAGCACCAAGGCAAACTCTACACCCCAGCCCAGGCCCAGGAAGCTGGCTTAAAACGGAAGGCACCGCCCCA
GATTCGCATTGAACAGATCCGCCAATTAGGGGAATTTCTCAGTCGTCCGGCCCTGGAAGCTCCTCGTTGTGTGGTGGTGA
TCGAGGCGGCCCAGACCATGGCAGAGGCTCCGGCCAATGCTCTTTTAAAAACCCTAGAGGAACCCGGCAACGCGACGTTA
ATTTTACTGGCCCCCAGTGGCGATAGTTTGTTGCCGACCCTCGTTTCCCGCTGCCAAAAGATCCCTTTTTATCGCCTTTC
CCAGGACGATGTGGCGCAAATCTTAACGGCCCAAGGTTATCAACACATTTTGGCCGATGCAACGATTTTGGCGATCGCCC
AGGGGAGTCCCGGTGCCGCGATCCAAATTTACGAGCTACTGAGTAATGTCCCCCAGGATTTATTACAAAGCCTCCAGCAA
CTCCCCCAAAACCCCCTTGGCGCTTTTAGCCTCGCGAAGGGAATTCACAATGCCCTTGACATAGAAGTGCAATTGCAACT
TATTGACTACCTCCAATATCAGTACTGGCAACGGTTTCACAATGATCAACTGATCCAGCGCCTCGAAACCACCCGAAAAT
ACCTCCGTAATTATGTTCAGCCCCGTCTCGTGTGGGAAACTTTCTTCTTAGAATTTTGCCAAACTAGCCCTTAA

Upstream 100 bases:

>100_bases
TCCAACGAAGTAGGAGCAAGTATAACGCGCCATAAAAAATATCTTTCAACCATGCTGAAGCATTCTTTTTTATATTACCG
AACGGGAGGCCCCTAACCGA

Downstream 100 bases:

>100_bases
CACCACTGCTGCTGTCACTGGGGATGATGTAGCGCTGGAGGAAAACAAACAGGATCATCACTGGCAAGATAGAGATAATC
GAACCCGCCGCGATCAAGCG

Product: DNA polymerase III subunit delta'

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MISLDQVLGQPQAVSLLRQAIAQDRLAPAYLFAGPEGIGRSLTARGFTTALMTQEVPEAAQRLIRYKLLKNNHPDLLWVE
PTYQHQGKLYTPAQAQEAGLKRKAPPQIRIEQIRQLGEFLSRPALEAPRCVVVIEAAQTMAEAPANALLKTLEEPGNATL
ILLAPSGDSLLPTLVSRCQKIPFYRLSQDDVAQILTAQGYQHILADATILAIAQGSPGAAIQIYELLSNVPQDLLQSLQQ
LPQNPLGAFSLAKGIHNALDIEVQLQLIDYLQYQYWQRFHNDQLIQRLETTRKYLRNYVQPRLVWETFFLEFCQTSP

Sequences:

>Translated_317_residues
MISLDQVLGQPQAVSLLRQAIAQDRLAPAYLFAGPEGIGRSLTARGFTTALMTQEVPEAAQRLIRYKLLKNNHPDLLWVE
PTYQHQGKLYTPAQAQEAGLKRKAPPQIRIEQIRQLGEFLSRPALEAPRCVVVIEAAQTMAEAPANALLKTLEEPGNATL
ILLAPSGDSLLPTLVSRCQKIPFYRLSQDDVAQILTAQGYQHILADATILAIAQGSPGAAIQIYELLSNVPQDLLQSLQQ
LPQNPLGAFSLAKGIHNALDIEVQLQLIDYLQYQYWQRFHNDQLIQRLETTRKYLRNYVQPRLVWETFFLEFCQTSP
>Mature_317_residues
MISLDQVLGQPQAVSLLRQAIAQDRLAPAYLFAGPEGIGRSLTARGFTTALMTQEVPEAAQRLIRYKLLKNNHPDLLWVE
PTYQHQGKLYTPAQAQEAGLKRKAPPQIRIEQIRQLGEFLSRPALEAPRCVVVIEAAQTMAEAPANALLKTLEEPGNATL
ILLAPSGDSLLPTLVSRCQKIPFYRLSQDDVAQILTAQGYQHILADATILAIAQGSPGAAIQIYELLSNVPQDLLQSLQQ
LPQNPLGAFSLAKGIHNALDIEVQLQLIDYLQYQYWQRFHNDQLIQRLETTRKYLRNYVQPRLVWETFFLEFCQTSP

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria [H]

COG id: COG0470

COG function: function code L; ATPase involved in DNA replication

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004622 [H]

Pfam domain/function: NA

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 35527; Mature: 35527

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLDQVLGQPQAVSLLRQAIAQDRLAPAYLFAGPEGIGRSLTARGFTTALMTQEVPEAA
CCCHHHHHCCCHHHHHHHHHHHHHCCCCHHEEECCHHHCCCHHHHHHHHHHHHHHHHHHH
QRLIRYKLLKNNHPDLLWVEPTYQHQGKLYTPAQAQEAGLKRKAPPQIRIEQIRQLGEFL
HHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
SRPALEAPRCVVVIEAAQTMAEAPANALLKTLEEPGNATLILLAPSGDSLLPTLVSRCQK
CCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHC
IPFYRLSQDDVAQILTAQGYQHILADATILAIAQGSPGAAIQIYELLSNVPQDLLQSLQQ
CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LPQNPLGAFSLAKGIHNALDIEVQLQLIDYLQYQYWQRFHNDQLIQRLETTRKYLRNYVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRLVWETFFLEFCQTSP
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISLDQVLGQPQAVSLLRQAIAQDRLAPAYLFAGPEGIGRSLTARGFTTALMTQEVPEAA
CCCHHHHHCCCHHHHHHHHHHHHHCCCCHHEEECCHHHCCCHHHHHHHHHHHHHHHHHHH
QRLIRYKLLKNNHPDLLWVEPTYQHQGKLYTPAQAQEAGLKRKAPPQIRIEQIRQLGEFL
HHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
SRPALEAPRCVVVIEAAQTMAEAPANALLKTLEEPGNATLILLAPSGDSLLPTLVSRCQK
CCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHC
IPFYRLSQDDVAQILTAQGYQHILADATILAIAQGSPGAAIQIYELLSNVPQDLLQSLQQ
CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LPQNPLGAFSLAKGIHNALDIEVQLQLIDYLQYQYWQRFHNDQLIQRLETTRKYLRNYVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRLVWETFFLEFCQTSP
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]