| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is thiL [H]
Identifier: 170077870
GI number: 170077870
Start: 1296283
End: 1297275
Strand: Direct
Name: thiL [H]
Synonym: SYNPCC7002_A1254
Alternate gene names: 170077870
Gene position: 1296283-1297275 (Clockwise)
Preceding gene: 170077868
Following gene: 170077871
Centisome position: 43.09
GC content: 55.59
Gene sequence:
>993_bases ATGACGGCAGGAAAATGTCTCAAGGATTTTGGGGAAGCGGAGATTCTCCAGCGGCTGCAGCGGTTTTGTCCAGCAGAAAT TATCGGCGATGATGGGGCAGTTTTAACGTTCCCCCCTGGCCAGAATTTAGTCGTGACGACGGATGTGCTGGTGGATGGCG TCCATTTTGGCGATCGCACGATGCCCCCAGAGAAAGTAGGCTGGCGAGCAGTGGCGGCAAATTTATCGGATTTAGCAGCG ATGGGGGCCACACCAATCGGCATTACCGTGGGTTTATCTCTGCCTCCTGAAACACCGATTTTGTGGCTCGATCAGCTTTA TCAAGGGTTAGCTGCCTGTTTAGGTCGTTATGGTACGCCTTTAGTCGGTGGGGATCTAACGCGATCGCCGGTGAAAACCA TCGGCATTACGGCCTTTGGGGTGGTGTCACCGCACCGTGCGATTCAGCGCAGTAGCGCGAAAGTGGGCGATGTGATTCTC GTTACGGGTTGCCATGGGGATTCCCGTGCGGGCCTGGAATTGCTGCTCCATACCAATGCTCGCTCTCAAACTTTATCGAT AGGCGATCGCCAAGCCTTGATCCGCGCCCACCAAACGCCCCAACCCCGCCTGGATGTGCTGCCGCATTTAAACTCCTCAG ATTCGCCCCCAGCAGGGATGGATAGTAGCGATGGTTTGGCCGATGCCGTGCTGCAAATTTGTCAACGCAGTGGTGTCGGT GCCGTAGTGGAAGCAGAGAAAATCCCCTTGTCCCCGGCCCTTCGGCGTTATCAAGATCCAGAAACGGCTTTGCGGTGGGC TTTGTACGGTGGCGAAGATTTTGAACTGGTGCTTTGTCTCCCCCCGATGGCGGCGGAACGGCTCCTGGCCAAGCTTCCAG GTCAAGGGGCGATTATCGGCCAGATTACCGCCGAGCAAACGGTGGCGATCGCCAATGGTGCAGGCCAAACCATGCCCTTA AGCCAAACTCAAACTTTTCAACACTTTGCCTAA
Upstream 100 bases:
>100_bases ACTATTTCCTCGATTTTACAAAAAAAGTAATGGATTTAGTCAATTACTATACTTTTTCAGAGCATAAACAATTCATCATG GAGGGCTTGGCGAGAAAACG
Downstream 100 bases:
>100_bases CGTTTTCCTTGCCGAGATCCCCAGCCGAATGTGACAAAATAAGGCTGCAATCTTCTCCATGTCGGCCCTCCATGAATCGC CTGAAAACCGCTGCCACTTA
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTAGKCLKDFGEAEILQRLQRFCPAEIIGDDGAVLTFPPGQNLVVTTDVLVDGVHFGDRTMPPEKVGWRAVAANLSDLAA MGATPIGITVGLSLPPETPILWLDQLYQGLAACLGRYGTPLVGGDLTRSPVKTIGITAFGVVSPHRAIQRSSAKVGDVIL VTGCHGDSRAGLELLLHTNARSQTLSIGDRQALIRAHQTPQPRLDVLPHLNSSDSPPAGMDSSDGLADAVLQICQRSGVG AVVEAEKIPLSPALRRYQDPETALRWALYGGEDFELVLCLPPMAAERLLAKLPGQGAIIGQITAEQTVAIANGAGQTMPL SQTQTFQHFA
Sequences:
>Translated_330_residues MTAGKCLKDFGEAEILQRLQRFCPAEIIGDDGAVLTFPPGQNLVVTTDVLVDGVHFGDRTMPPEKVGWRAVAANLSDLAA MGATPIGITVGLSLPPETPILWLDQLYQGLAACLGRYGTPLVGGDLTRSPVKTIGITAFGVVSPHRAIQRSSAKVGDVIL VTGCHGDSRAGLELLLHTNARSQTLSIGDRQALIRAHQTPQPRLDVLPHLNSSDSPPAGMDSSDGLADAVLQICQRSGVG AVVEAEKIPLSPALRRYQDPETALRWALYGGEDFELVLCLPPMAAERLLAKLPGQGAIIGQITAEQTVAIANGAGQTMPL SQTQTFQHFA >Mature_329_residues TAGKCLKDFGEAEILQRLQRFCPAEIIGDDGAVLTFPPGQNLVVTTDVLVDGVHFGDRTMPPEKVGWRAVAANLSDLAAM GATPIGITVGLSLPPETPILWLDQLYQGLAACLGRYGTPLVGGDLTRSPVKTIGITAFGVVSPHRAIQRSSAKVGDVILV TGCHGDSRAGLELLLHTNARSQTLSIGDRQALIRAHQTPQPRLDVLPHLNSSDSPPAGMDSSDGLADAVLQICQRSGVGA VVEAEKIPLSPALRRYQDPETALRWALYGGEDFELVLCLPPMAAERLLAKLPGQGAIIGQITAEQTVAIANGAGQTMPLS QTQTFQHFA
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=309, Percent_Identity=40.453074433657, Blast_Score=174, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34857; Mature: 34726
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGKCLKDFGEAEILQRLQRFCPAEIIGDDGAVLTFPPGQNLVVTTDVLVDGVHFGDRT CCHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEHHHEEECEECCCCC MPPEKVGWRAVAANLSDLAAMGATPIGITVGLSLPPETPILWLDQLYQGLAACLGRYGTP CCHHHHCHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC LVGGDLTRSPVKTIGITAFGVVSPHRAIQRSSAKVGDVILVTGCHGDSRAGLELLLHTNA CCCCCCCCCCHHHHCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCC RSQTLSIGDRQALIRAHQTPQPRLDVLPHLNSSDSPPAGMDSSDGLADAVLQICQRSGVG CCCEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AVVEAEKIPLSPALRRYQDPETALRWALYGGEDFELVLCLPPMAAERLLAKLPGQGAIIG EEEECCCCCCCHHHHHCCCHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCEEEE QITAEQTVAIANGAGQTMPLSQTQTFQHFA EECCCCEEEEECCCCCCCCCCCCCHHHHCC >Mature Secondary Structure TAGKCLKDFGEAEILQRLQRFCPAEIIGDDGAVLTFPPGQNLVVTTDVLVDGVHFGDRT CHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEHHHEEECEECCCCC MPPEKVGWRAVAANLSDLAAMGATPIGITVGLSLPPETPILWLDQLYQGLAACLGRYGTP CCHHHHCHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC LVGGDLTRSPVKTIGITAFGVVSPHRAIQRSSAKVGDVILVTGCHGDSRAGLELLLHTNA CCCCCCCCCCHHHHCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCC RSQTLSIGDRQALIRAHQTPQPRLDVLPHLNSSDSPPAGMDSSDGLADAVLQICQRSGVG CCCEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AVVEAEKIPLSPALRRYQDPETALRWALYGGEDFELVLCLPPMAAERLLAKLPGQGAIIG EEEECCCCCCCHHHHHCCCHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCEEEE QITAEQTVAIANGAGQTMPLSQTQTFQHFA EECCCCEEEEECCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA