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The map label for this gene is crtU [H]

Identifier: 170077864

GI number: 170077864

Start: 1288169

End: 1290106

Strand: Direct

Name: crtU [H]

Synonym: SYNPCC7002_A1248

Alternate gene names: 170077864

Gene position: 1288169-1290106 (Clockwise)

Preceding gene: 170077863

Following gene: 170077866

Centisome position: 42.82

GC content: 52.12

Gene sequence:

>1938_bases
ATGAGTGACAACACTTCCCTTCCCCCCATTTCCCGCCGTAGCGCCCTCAAACTCCTTGGGGTGGGAGCCGCCGGATCGAT
GGTCGGGTACACCCGCTTCGCCAAACCCCACCCGACGATCCACCAGCAAGAATCCTTGGATTTACCCCACTATCACAGCC
AGGGAAAAAAAGTCGTTGTCATTGGGGGCGGTTTAGCAGGGCTGGCCGCTGCCTACGAATTAAGCCAACGGGGTTTTCAG
GTCACGCTGTTAGAAAAATCCCCCCAACTCGGTGGCAAGGTCGCCAGTTGGAAAATTAATGTCGGTGAAGATGAGTTCAT
GATGGAACATGGCTTCCACGGCTTTTTTCCCCAGTATTACAACCTCAAGAGCTTGGTTAGTGAACTGAGCATCAACGACA
ATTTTCAATCCTTAGATTTTTATTCCCTCGTTTTCAAAGATCCAGACCGCTATCGCCCAGAGGTATTTCGTCCTAGTAAT
ACCGCATTTCCTTGGAATATCGTGGATCTCGCCATTTCTTCGCCGAACCGACTCCGTTGGGGCATTAATCTCACAAAAAT
TAAGCATTTAGAGGTTTTTCACGCGATTACGGGCTTTAAAATCCCCCGTACCTACGACACCTACGACACCATCACCGTGG
CCGATTGGGTCCGGGGTGAATTTCCCCAGGGCCTTTATGACCTCTACTTTTTACCCTTCGCCAAATCTAGCCTCAATGCC
CCTGATACCTTGAGCACAGGGGAATTGCTGCAATTTTTTCACTTCTACTTTTTCGGAAATCCAGAGGGCCTAGCGTTTAA
CGGCACCGTGGATGACATGGGCACGAGCCTCGTTCAACCCATTGCCGACGCCATCCGCGCGAAAGGGGGCCAAATTTTGA
CCGATGTGTCCGTCAGCGAAATTCAATGTCAGGACAACAAAATCCAGGCGATCGCCTACCAACAGGGAGACGAACAAACG
GATGTACCTTTCTGGACGAAGCAGAATGAATTGATTACCGATGACAGTCTGGAATATTACGGCGCTGGGGATGCAATGTA
TGCGGTCAATCCGGCAACGGAGGAAGGCTTGTCCTTAACCTGCACCCACCAGGGTTGTACCGTTGGTCGGCAACCGGATG
GATCTTTCCTCTGTCCCTGTCATGGCGCTCGCTATGATGCCAATGGTAAACGTCTGAGTGGCCCCGCCCAACGGGATTTA
GCTCCCTTTAAAGTCCAAGCCCGTGAAGCTGATCAGGTACAGTTGGTGGCCGAAAATCCCAGTGATGAACTCCAGCGGGG
CACCCTTGCCGCCGATTATGTAGTGCTGGCAACGGACGTGCCCGGAACTCGCCATTTGTTTACCCGCTTAGTGGGAGACC
GGGATCCAGAGGCAGAACGTAAAGTTGATCAGCTCGTGGTGTCTGATCCCTTTGCGGTGGGACGGTTCTGGTTGGATCGA
GATTTCCCCTGGGAGCATAGTAAGTTTGCATCGTTATCGGGCTATGCCTTGACCGATAGCATTACCCTATATCACCAAAT
CCAGACCCAGTTTAAGGATTGGGCCGCCCGCACCGGGGGTAGTGTGGTGGAGCTCCATGCTTACTGTTATAAGGAAAAAG
AGTTTCCTACCCAAGAGGCACTGTTGGCCACCTTTGAGCAGGAACTATACGAAATTGTGCCGGAACTAAAGGGGGCGACG
GTGCTCCATCGGCAACTGGTAAACCAAAAGAATTTCTCTGGCTATCCCCCCAATAGCTATGGCGATCGCCCCACCACCGA
AAGCGAAATTAGCAACCTCATGTATGCGGGGGATTGGGTAAAAATGCCGTTCCCCTGTGGCTTGATGGAACGGGCAATCA
GTAGCGGTTTGCTCGCTGCCAATAGCGTTCTCCAACGGGAAGGGATACAGCGGCGGCCGATTCTCTCGGTGAATCCGGAG
GGGGTTTTTAAAATCTAA

Upstream 100 bases:

>100_bases
TCTTTTTGCGCAAATGTGACAAAGTGCCGAAAAAAACAACCCACCCCCAGCAAATCAGTTCATAATAATTGACACTAGAT
GTGCAATTAAACTGAATGGC

Downstream 100 bases:

>100_bases
ATTTATTCAGATTTGGTCTGTTTGAGTTTGGCGATCGCCCCGACGAAACCCAAGACCACCAACACATTGGAGAGGGTCAA
AAAAGATTCAGCGCCGCCAT

Product: beta-carotene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MSDNTSLPPISRRSALKLLGVGAAGSMVGYTRFAKPHPTIHQQESLDLPHYHSQGKKVVVIGGGLAGLAAAYELSQRGFQ
VTLLEKSPQLGGKVASWKINVGEDEFMMEHGFHGFFPQYYNLKSLVSELSINDNFQSLDFYSLVFKDPDRYRPEVFRPSN
TAFPWNIVDLAISSPNRLRWGINLTKIKHLEVFHAITGFKIPRTYDTYDTITVADWVRGEFPQGLYDLYFLPFAKSSLNA
PDTLSTGELLQFFHFYFFGNPEGLAFNGTVDDMGTSLVQPIADAIRAKGGQILTDVSVSEIQCQDNKIQAIAYQQGDEQT
DVPFWTKQNELITDDSLEYYGAGDAMYAVNPATEEGLSLTCTHQGCTVGRQPDGSFLCPCHGARYDANGKRLSGPAQRDL
APFKVQAREADQVQLVAENPSDELQRGTLAADYVVLATDVPGTRHLFTRLVGDRDPEAERKVDQLVVSDPFAVGRFWLDR
DFPWEHSKFASLSGYALTDSITLYHQIQTQFKDWAARTGGSVVELHAYCYKEKEFPTQEALLATFEQELYEIVPELKGAT
VLHRQLVNQKNFSGYPPNSYGDRPTTESEISNLMYAGDWVKMPFPCGLMERAISSGLLAANSVLQREGIQRRPILSVNPE
GVFKI

Sequences:

>Translated_645_residues
MSDNTSLPPISRRSALKLLGVGAAGSMVGYTRFAKPHPTIHQQESLDLPHYHSQGKKVVVIGGGLAGLAAAYELSQRGFQ
VTLLEKSPQLGGKVASWKINVGEDEFMMEHGFHGFFPQYYNLKSLVSELSINDNFQSLDFYSLVFKDPDRYRPEVFRPSN
TAFPWNIVDLAISSPNRLRWGINLTKIKHLEVFHAITGFKIPRTYDTYDTITVADWVRGEFPQGLYDLYFLPFAKSSLNA
PDTLSTGELLQFFHFYFFGNPEGLAFNGTVDDMGTSLVQPIADAIRAKGGQILTDVSVSEIQCQDNKIQAIAYQQGDEQT
DVPFWTKQNELITDDSLEYYGAGDAMYAVNPATEEGLSLTCTHQGCTVGRQPDGSFLCPCHGARYDANGKRLSGPAQRDL
APFKVQAREADQVQLVAENPSDELQRGTLAADYVVLATDVPGTRHLFTRLVGDRDPEAERKVDQLVVSDPFAVGRFWLDR
DFPWEHSKFASLSGYALTDSITLYHQIQTQFKDWAARTGGSVVELHAYCYKEKEFPTQEALLATFEQELYEIVPELKGAT
VLHRQLVNQKNFSGYPPNSYGDRPTTESEISNLMYAGDWVKMPFPCGLMERAISSGLLAANSVLQREGIQRRPILSVNPE
GVFKI
>Mature_644_residues
SDNTSLPPISRRSALKLLGVGAAGSMVGYTRFAKPHPTIHQQESLDLPHYHSQGKKVVVIGGGLAGLAAAYELSQRGFQV
TLLEKSPQLGGKVASWKINVGEDEFMMEHGFHGFFPQYYNLKSLVSELSINDNFQSLDFYSLVFKDPDRYRPEVFRPSNT
AFPWNIVDLAISSPNRLRWGINLTKIKHLEVFHAITGFKIPRTYDTYDTITVADWVRGEFPQGLYDLYFLPFAKSSLNAP
DTLSTGELLQFFHFYFFGNPEGLAFNGTVDDMGTSLVQPIADAIRAKGGQILTDVSVSEIQCQDNKIQAIAYQQGDEQTD
VPFWTKQNELITDDSLEYYGAGDAMYAVNPATEEGLSLTCTHQGCTVGRQPDGSFLCPCHGARYDANGKRLSGPAQRDLA
PFKVQAREADQVQLVAENPSDELQRGTLAADYVVLATDVPGTRHLFTRLVGDRDPEAERKVDQLVVSDPFAVGRFWLDRD
FPWEHSKFASLSGYALTDSITLYHQIQTQFKDWAARTGGSVVELHAYCYKEKEFPTQEALLATFEQELYEIVPELKGATV
LHRQLVNQKNFSGYPPNSYGDRPTTESEISNLMYAGDWVKMPFPCGLMERAISSGLLAANSVLQREGIQRRPILSVNPEG
VFKI

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001613
- InterPro:   IPR002937
- InterPro:   IPR014102 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 71955; Mature: 71824

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNTSLPPISRRSALKLLGVGAAGSMVGYTRFAKPHPTIHQQESLDLPHYHSQGKKVVV
CCCCCCCCCCCHHCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEE
IGGGLAGLAAAYELSQRGFQVTLLEKSPQLGGKVASWKINVGEDEFMMEHGFHGFFPQYY
ECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHC
NLKSLVSELSINDNFQSLDFYSLVFKDPDRYRPEVFRPSNTAFPWNIVDLAISSPNRLRW
CHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCEEEE
GINLTKIKHLEVFHAITGFKIPRTYDTYDTITVADWVRGEFPQGLYDLYFLPFAKSSLNA
CEEHEEEHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHEECCCHHCCCCC
PDTLSTGELLQFFHFYFFGNPEGLAFNGTVDDMGTSLVQPIADAIRAKGGQILTDVSVSE
CCCCCHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
IQCQDNKIQAIAYQQGDEQTDVPFWTKQNELITDDSLEYYGAGDAMYAVNPATEEGLSLT
EEECCCCEEEEEEECCCCCCCCCEEECCCCEECCCCEEEECCCCEEEEECCCCCCCCEEE
CTHQGCTVGRQPDGSFLCPCHGARYDANGKRLSGPAQRDLAPFKVQAREADQVQLVAENP
EECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCHHHCCCCEEEECCCCCEEEEEECCC
SDELQRGTLAADYVVLATDVPGTRHLFTRLVGDRDPEAERKVDQLVVSDPFAVGRFWLDR
HHHHHCCCEEECEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHEEECC
DFPWEHSKFASLSGYALTDSITLYHQIQTQFKDWAARTGGSVVELHAYCYKEKEFPTQEA
CCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHH
LLATFEQELYEIVPELKGATVLHRQLVNQKNFSGYPPNSYGDRPTTESEISNLMYAGDWV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCEE
KMPFPCGLMERAISSGLLAANSVLQREGIQRRPILSVNPEGVFKI
ECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCEEC
>Mature Secondary Structure 
SDNTSLPPISRRSALKLLGVGAAGSMVGYTRFAKPHPTIHQQESLDLPHYHSQGKKVVV
CCCCCCCCCCHHCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEE
IGGGLAGLAAAYELSQRGFQVTLLEKSPQLGGKVASWKINVGEDEFMMEHGFHGFFPQYY
ECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHC
NLKSLVSELSINDNFQSLDFYSLVFKDPDRYRPEVFRPSNTAFPWNIVDLAISSPNRLRW
CHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCEEEE
GINLTKIKHLEVFHAITGFKIPRTYDTYDTITVADWVRGEFPQGLYDLYFLPFAKSSLNA
CEEHEEEHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHEECCCHHCCCCC
PDTLSTGELLQFFHFYFFGNPEGLAFNGTVDDMGTSLVQPIADAIRAKGGQILTDVSVSE
CCCCCHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
IQCQDNKIQAIAYQQGDEQTDVPFWTKQNELITDDSLEYYGAGDAMYAVNPATEEGLSLT
EEECCCCEEEEEEECCCCCCCCCEEECCCCEECCCCEEEECCCCEEEEECCCCCCCCEEE
CTHQGCTVGRQPDGSFLCPCHGARYDANGKRLSGPAQRDLAPFKVQAREADQVQLVAENP
EECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCHHHCCCCEEEECCCCCEEEEEECCC
SDELQRGTLAADYVVLATDVPGTRHLFTRLVGDRDPEAERKVDQLVVSDPFAVGRFWLDR
HHHHHCCCEEECEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHEEECC
DFPWEHSKFASLSGYALTDSITLYHQIQTQFKDWAARTGGSVVELHAYCYKEKEFPTQEA
CCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHH
LLATFEQELYEIVPELKGATVLHRQLVNQKNFSGYPPNSYGDRPTTESEISNLMYAGDWV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCEE
KMPFPCGLMERAISSGLLAANSVLQREGIQRRPILSVNPEGVFKI
ECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1581575; 8905231 [H]