| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is ppa [H]
Identifier: 170077844
GI number: 170077844
Start: 1272528
End: 1273037
Strand: Direct
Name: ppa [H]
Synonym: SYNPCC7002_A1228
Alternate gene names: 170077844
Gene position: 1272528-1273037 (Clockwise)
Preceding gene: 170077843
Following gene: 170077846
Centisome position: 42.3
GC content: 49.22
Gene sequence:
>510_bases GTGGATTTATCTCGGATTCCTGCCCAACCGAAAGCTGGTTTGATTAATGTTTTGATCGAAATCCCCGGCGGCAGCAAAAA CAAGTATGAGTTCGATAAGGATATGAATGCCTTTGCCCTCGACCGGGTGCTCTTTTCTTCGGTGAAATATCCCTACGACT ATGGCTTCGTGCCCAATACCCTCGCCGATGATGGCGATCCCCTCGATGGGATGGTGATTATGGACGAGCCGACCTTCCCT GGTTGTGTCATCGCTGCCCGCCCCATTGGGATGCTGGAAATGATCGACGGTGGCGATCGCGACGAAAAAATTCTCTGTGT TCCCGCTGAAGATCCCCGTTACAACGACATTAAATCCATCAAACAGATCTCCCAGCACCGCCTAGATGAAATTGCCGAAT TCTTTGCCTCCTACAAGAACCTGGAGAAAAAAGAAGTGGAAATTTTAGGCTGGAAAGATATTGATGCCGTTGCGCCCATC GTGGAAGAGTGCGTCAAAGCTTACAAATAG
Upstream 100 bases:
>100_bases CTTCTGTGTAGAATGCTTGAGGGCGATCGCCTCGCACTTTTTTAGAGTGTTTCAGGGCCGCCTCAACCCTTTGTTCTGGA TATATTTGGAGAAATTACCC
Downstream 100 bases:
>100_bases AGTGCTGTAAATTGACAATGTTTAAGGGTGGGCGTGTTCTTATTGGGATGCGCCCCTTGCTTTGGGTTCTAAGCCAAGAC CCCATGGAGAAAAATGTCGG
Product: inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI VEECVKAYK
Sequences:
>Translated_169_residues MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI VEECVKAYK >Mature_169_residues MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI VEECVKAYK
Specific function: Hydrolyzes PPi generated in anabolic reactions [H]
COG id: COG0221
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790673, Length=146, Percent_Identity=39.7260273972603, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008162 [H]
Pfam domain/function: PF00719 Pyrophosphatase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 18949; Mature: 18949
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNT CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LADDGDPLDGMVIMDEPTFPGCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSI CCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHH KQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPIVEECVKAYK HHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNT CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LADDGDPLDGMVIMDEPTFPGCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSI CCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHH KQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPIVEECVKAYK HHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]