| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077838
Identifier: 170077838
GI number: 170077838
Start: 1266773
End: 1267852
Strand: Reverse
Name: 170077838
Synonym: SYNPCC7002_A1222
Alternate gene names: NA
Gene position: 1267852-1266773 (Counterclockwise)
Preceding gene: 170077839
Following gene: 170077837
Centisome position: 42.15
GC content: 51.76
Gene sequence:
>1080_bases ATGGCAATTTGGGATTTCGGTCGCTTTATGCAGACCCTCATTCAGTTCGATGTTATGCCGGGGAGTCAACTGATTAAGCC TTGGTTGGGTCAAGAAAACGTGGCAGCGGATAATGAAACATTTGGAGGCAGCGCCCAGATGGGAAAAATTTTAGTGGTGG GTGGCGATCGCCCAGAAAATCAAACCCTTGTGCAGGCCCTTTCGGCTCGCGGCTATCAAACCCATTGGACGCAAGATGCT GATGAATCTCGAAATGGGGCGGCCATGCTTATTCTTTGTGCTGATCTCGCCGCCACAACCAGAGACTCCCTCCTCACCCA GGTGAGTCAAGATCCCCAATGGCGATCGCCCCAGTGGGAACTGTTTAATTTTCGCCAAGCGACCCCTGCCCTCGCCCAAC TGTGGGGGGCAGTAGACGACGTGGTGATGGGAGGTGTTAGCCAAAGTCAATTGCGGTTAACCCCGACTGGGGCGCTATTT ACAGGTAATGTCTCCACCGATAACAATGGCGGTTTTGCGTCGGTACGCACCAAAAGTTTGGCAAATCCCTGGGATCTATC TAAATATGCGGGGTTCCGGCTCCGGGTAAAGGGCGATGGCCAACGCTACAAATTTATTGCCCGCTGCGAAAACCGTTGGG ACGGCATTGGCTATAGTTATTCCTTTGAGACCACCGCAGATCAGTGGTTGAGCGTGGATATTCCGTTTAGCGAACTTGTG CCTGTTTTTCGGGCCAAATCCGTACCGCAAATGGGGCAATTTCAAGCTGACCGGGTCTATGCGTTGCAGTTGATGCTCAG TAAGTTTGAATATGATGGGCAACTCAATCCCAGCTTTCAGCCGGGGTTATTCCAACTAGCCATCGAGGCGATCGCCGTTT ATGGTGGTGAACCTTTCCCCCAAATTATTGCCCTGAGTCAAACCACCGCCCCCCAGGAAGCGCTCCAGGAAACGGGGCTC CCCTATTGTCTAATCCATTGTCCCCAGGGTTTTACCGCAGAAAATTTGCAAACTGTGATCAATGTCATTGGCGATCGCCA AGCCGTTAACCAAATTATTACCTGTGCAGCGTCACAGTAA
Upstream 100 bases:
>100_bases TCCGAGCCATTAACTAAAGGAAATCATTGCCTCGTTTTGGCGATCGCCCAGGGAAACCCGTTACACTTTGGCTAACGGAT CGGCAACCGAGGGAAACACA
Downstream 100 bases:
>100_bases CCAACAACTGGCCACCCATGGCAAAGAATTGCGGGGTATCCGGTTAGATATTTAGCATAAACAAGTAAGATCGAAAGCAT AAATACTTTGGCTGCCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAIWDFGRFMQTLIQFDVMPGSQLIKPWLGQENVAADNETFGGSAQMGKILVVGGDRPENQTLVQALSARGYQTHWTQDA DESRNGAAMLILCADLAATTRDSLLTQVSQDPQWRSPQWELFNFRQATPALAQLWGAVDDVVMGGVSQSQLRLTPTGALF TGNVSTDNNGGFASVRTKSLANPWDLSKYAGFRLRVKGDGQRYKFIARCENRWDGIGYSYSFETTADQWLSVDIPFSELV PVFRAKSVPQMGQFQADRVYALQLMLSKFEYDGQLNPSFQPGLFQLAIEAIAVYGGEPFPQIIALSQTTAPQEALQETGL PYCLIHCPQGFTAENLQTVINVIGDRQAVNQIITCAASQ
Sequences:
>Translated_359_residues MAIWDFGRFMQTLIQFDVMPGSQLIKPWLGQENVAADNETFGGSAQMGKILVVGGDRPENQTLVQALSARGYQTHWTQDA DESRNGAAMLILCADLAATTRDSLLTQVSQDPQWRSPQWELFNFRQATPALAQLWGAVDDVVMGGVSQSQLRLTPTGALF TGNVSTDNNGGFASVRTKSLANPWDLSKYAGFRLRVKGDGQRYKFIARCENRWDGIGYSYSFETTADQWLSVDIPFSELV PVFRAKSVPQMGQFQADRVYALQLMLSKFEYDGQLNPSFQPGLFQLAIEAIAVYGGEPFPQIIALSQTTAPQEALQETGL PYCLIHCPQGFTAENLQTVINVIGDRQAVNQIITCAASQ >Mature_358_residues AIWDFGRFMQTLIQFDVMPGSQLIKPWLGQENVAADNETFGGSAQMGKILVVGGDRPENQTLVQALSARGYQTHWTQDAD ESRNGAAMLILCADLAATTRDSLLTQVSQDPQWRSPQWELFNFRQATPALAQLWGAVDDVVMGGVSQSQLRLTPTGALFT GNVSTDNNGGFASVRTKSLANPWDLSKYAGFRLRVKGDGQRYKFIARCENRWDGIGYSYSFETTADQWLSVDIPFSELVP VFRAKSVPQMGQFQADRVYALQLMLSKFEYDGQLNPSFQPGLFQLAIEAIAVYGGEPFPQIIALSQTTAPQEALQETGLP YCLIHCPQGFTAENLQTVINVIGDRQAVNQIITCAASQ
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39597; Mature: 39466
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWDFGRFMQTLIQFDVMPGSQLIKPWLGQENVAADNETFGGSAQMGKILVVGGDRPEN CCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH QTLVQALSARGYQTHWTQDADESRNGAAMLILCADLAATTRDSLLTQVSQDPQWRSPQWE HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHH LFNFRQATPALAQLWGAVDDVVMGGVSQSQLRLTPTGALFTGNVSTDNNGGFASVRTKSL HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEHHCC ANPWDLSKYAGFRLRVKGDGQRYKFIARCENRWDGIGYSYSFETTADQWLSVDIPFSELV CCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHH PVFRAKSVPQMGQFQADRVYALQLMLSKFEYDGQLNPSFQPGLFQLAIEAIAVYGGEPFP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH QIIALSQTTAPQEALQETGLPYCLIHCPQGFTAENLQTVINVIGDRQAVNQIITCAASQ HEEEECCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure AIWDFGRFMQTLIQFDVMPGSQLIKPWLGQENVAADNETFGGSAQMGKILVVGGDRPEN CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH QTLVQALSARGYQTHWTQDADESRNGAAMLILCADLAATTRDSLLTQVSQDPQWRSPQWE HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHH LFNFRQATPALAQLWGAVDDVVMGGVSQSQLRLTPTGALFTGNVSTDNNGGFASVRTKSL HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEHHCC ANPWDLSKYAGFRLRVKGDGQRYKFIARCENRWDGIGYSYSFETTADQWLSVDIPFSELV CCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHH PVFRAKSVPQMGQFQADRVYALQLMLSKFEYDGQLNPSFQPGLFQLAIEAIAVYGGEPFP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH QIIALSQTTAPQEALQETGLPYCLIHCPQGFTAENLQTVINVIGDRQAVNQIITCAASQ HEEEECCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA