| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077837
Identifier: 170077837
GI number: 170077837
Start: 1265344
End: 1266624
Strand: Reverse
Name: 170077837
Synonym: SYNPCC7002_A1221
Alternate gene names: NA
Gene position: 1266624-1265344 (Counterclockwise)
Preceding gene: 170077838
Following gene: 170077836
Centisome position: 42.11
GC content: 50.59
Gene sequence:
>1281_bases ATGACTCCCCCTGTCTCTCTCCAAGCCATCATTCGAGAGTTAGAACAACACCCAGATGCCCAACGCATCAAAAAGTTGTT AATTTATACTGCTGTCAATCGGTGGGAAAGTAATCCCCAGTTACTCCAACGTCTCTCCCTGGAGCGCATCGTCAAAAAAA ATCTTGACCAGTTCTTGAGTTTCAAAGAACTCCAGCGGGCCTTTAGTACCTCTGTCAGTACCCTCAGTCGGCCTGCTACC TATGGTCGCCTTGCCAACGACATCTTGACCCAGTTAAGCCCCCTCTACGAAAACGAAGATCAAGATCCTTCGACGGGTAT TGTTGCTGCTGGCCAGAATAGCCACCAAAGCATTACAGAGATTCACCTAGAAGTTGCGGTGCAAACCCTCGAAGAACACC GCGAGAATATTCGCATCAAAAAATTACTCTATGCCCTTTGTTTTAAGCGTTGGGAAAATAGTTTTCAGGTTTTAGAAGAA TACAGTTTGGCTAACCTGTTACGCCAAGTCGTCGTTAACTACCCCACCCGTAACCAATTTGAGACGATCCTGCGCAAATT AGTGTCTCTGCTTAATCGCCAACAAATCTATGGCCAATTGGCTGATGTAATTCTTGGGGCGATCGCCCCCCTATACAAAT CCGGTGATTCTGCCACGGGTTTAACCCAACCCACCGCTGACCCCCCGGCGCCAGTTCCCACCCCAGTGGTGCCGCCCCCT CCCCCTCCCCCTGCCCCAAGTCCAGCACCAGAGTCTGTGAACTATAAGCAGACCATGGCTTTTAATATTGACGAGCTCCC CATTCCCAAGCCTGCCAAGTCGATGGATCTTGATTTCAGTGAAAATCAAACCCTGGCGCTAGATCCAGAGACCCAGATGA CCCAGACGATGTTGCTCAACACCGGCCCCCCTCGACCAATGCCGGCCCCTGCGCCTGCTCCGGTACCGAAAAAAAAGCAT TTTGCGGCGGCTCTCAACATCTACGAACTTAAGCTGGAGGTGATGAAATATGCGAATCCCCTCCGCACGAAAATTTTGCT GTTTTCCGTCGTCCATCATCCCTTTGACCTCAGTGGCAAAGACTGGTCAATGTTGCGTACCTGTGATTTTGATGAGTTAT TATCCGAAGTGCTGCGGGATGCCTCTAGTCTCAAGGCTTTGGAAATCAAACTTTCGGCGATCGCCCGGTCACTCTTTGAC GCCAACGAACATCTCCAAGCCGCCGGAGCCATTGTTCAAGCCGTGACGACTTTCACCAATCCCCCCGTCCATGACCTATG A
Upstream 100 bases:
>100_bases TATTTAGCATAAACAAGTAAGATCGAAAGCATAAATACTTTGGCTGCCTTAATCCTGTCCCCTTAAACGCTGGTTTCCCG TGGGAATTGTTTCTCAACCT
Downstream 100 bases:
>100_bases CCCCCCAAGAACTCATTGCTAAATATGCGCTTGGAGAAACCCATTTCCCAGAAGCCCAACTCGATGGCGCGAACTTTTGG GGGGCAGATCTCATCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPAT YGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEE YSLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKH FAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFD ANEHLQAAGAIVQAVTTFTNPPVHDL
Sequences:
>Translated_426_residues MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPAT YGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEE YSLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKH FAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFD ANEHLQAAGAIVQAVTTFTNPPVHDL >Mature_425_residues TPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPATY GRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEY SLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPPP PPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKHF AAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDA NEHLQAAGAIVQAVTTFTNPPVHDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47607; Mature: 47476
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FKELQRAFSTSVSTLSRPATYGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH IHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEYSLANLLRQVVVNYPTRNQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLN CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHC TGPPRPMPAPAPAPVPKKKHFAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC DWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDANEHLQAAGAIVQAVTTFTN CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPVHDL CCCCCC >Mature Secondary Structure TPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FKELQRAFSTSVSTLSRPATYGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH IHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEYSLANLLRQVVVNYPTRNQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLN CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHC TGPPRPMPAPAPAPVPKKKHFAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC DWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDANEHLQAAGAIVQAVTTFTN CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPVHDL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA