Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077837

Identifier: 170077837

GI number: 170077837

Start: 1265344

End: 1266624

Strand: Reverse

Name: 170077837

Synonym: SYNPCC7002_A1221

Alternate gene names: NA

Gene position: 1266624-1265344 (Counterclockwise)

Preceding gene: 170077838

Following gene: 170077836

Centisome position: 42.11

GC content: 50.59

Gene sequence:

>1281_bases
ATGACTCCCCCTGTCTCTCTCCAAGCCATCATTCGAGAGTTAGAACAACACCCAGATGCCCAACGCATCAAAAAGTTGTT
AATTTATACTGCTGTCAATCGGTGGGAAAGTAATCCCCAGTTACTCCAACGTCTCTCCCTGGAGCGCATCGTCAAAAAAA
ATCTTGACCAGTTCTTGAGTTTCAAAGAACTCCAGCGGGCCTTTAGTACCTCTGTCAGTACCCTCAGTCGGCCTGCTACC
TATGGTCGCCTTGCCAACGACATCTTGACCCAGTTAAGCCCCCTCTACGAAAACGAAGATCAAGATCCTTCGACGGGTAT
TGTTGCTGCTGGCCAGAATAGCCACCAAAGCATTACAGAGATTCACCTAGAAGTTGCGGTGCAAACCCTCGAAGAACACC
GCGAGAATATTCGCATCAAAAAATTACTCTATGCCCTTTGTTTTAAGCGTTGGGAAAATAGTTTTCAGGTTTTAGAAGAA
TACAGTTTGGCTAACCTGTTACGCCAAGTCGTCGTTAACTACCCCACCCGTAACCAATTTGAGACGATCCTGCGCAAATT
AGTGTCTCTGCTTAATCGCCAACAAATCTATGGCCAATTGGCTGATGTAATTCTTGGGGCGATCGCCCCCCTATACAAAT
CCGGTGATTCTGCCACGGGTTTAACCCAACCCACCGCTGACCCCCCGGCGCCAGTTCCCACCCCAGTGGTGCCGCCCCCT
CCCCCTCCCCCTGCCCCAAGTCCAGCACCAGAGTCTGTGAACTATAAGCAGACCATGGCTTTTAATATTGACGAGCTCCC
CATTCCCAAGCCTGCCAAGTCGATGGATCTTGATTTCAGTGAAAATCAAACCCTGGCGCTAGATCCAGAGACCCAGATGA
CCCAGACGATGTTGCTCAACACCGGCCCCCCTCGACCAATGCCGGCCCCTGCGCCTGCTCCGGTACCGAAAAAAAAGCAT
TTTGCGGCGGCTCTCAACATCTACGAACTTAAGCTGGAGGTGATGAAATATGCGAATCCCCTCCGCACGAAAATTTTGCT
GTTTTCCGTCGTCCATCATCCCTTTGACCTCAGTGGCAAAGACTGGTCAATGTTGCGTACCTGTGATTTTGATGAGTTAT
TATCCGAAGTGCTGCGGGATGCCTCTAGTCTCAAGGCTTTGGAAATCAAACTTTCGGCGATCGCCCGGTCACTCTTTGAC
GCCAACGAACATCTCCAAGCCGCCGGAGCCATTGTTCAAGCCGTGACGACTTTCACCAATCCCCCCGTCCATGACCTATG
A

Upstream 100 bases:

>100_bases
TATTTAGCATAAACAAGTAAGATCGAAAGCATAAATACTTTGGCTGCCTTAATCCTGTCCCCTTAAACGCTGGTTTCCCG
TGGGAATTGTTTCTCAACCT

Downstream 100 bases:

>100_bases
CCCCCCAAGAACTCATTGCTAAATATGCGCTTGGAGAAACCCATTTCCCAGAAGCCCAACTCGATGGCGCGAACTTTTGG
GGGGCAGATCTCATCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPAT
YGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEE
YSLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP
PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKH
FAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFD
ANEHLQAAGAIVQAVTTFTNPPVHDL

Sequences:

>Translated_426_residues
MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPAT
YGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEE
YSLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP
PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKH
FAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFD
ANEHLQAAGAIVQAVTTFTNPPVHDL
>Mature_425_residues
TPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLSFKELQRAFSTSVSTLSRPATY
GRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITEIHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEY
SLANLLRQVVVNYPTRNQFETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPPP
PPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLNTGPPRPMPAPAPAPVPKKKHF
AAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGKDWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDA
NEHLQAAGAIVQAVTTFTNPPVHDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47607; Mature: 47476

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FKELQRAFSTSVSTLSRPATYGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH
IHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEYSLANLLRQVVVNYPTRNQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLN
CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHC
TGPPRPMPAPAPAPVPKKKHFAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
DWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDANEHLQAAGAIVQAVTTFTN
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPVHDL
CCCCCC
>Mature Secondary Structure 
TPPVSLQAIIRELEQHPDAQRIKKLLIYTAVNRWESNPQLLQRLSLERIVKKNLDQFLS
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FKELQRAFSTSVSTLSRPATYGRLANDILTQLSPLYENEDQDPSTGIVAAGQNSHQSITE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH
IHLEVAVQTLEEHRENIRIKKLLYALCFKRWENSFQVLEEYSLANLLRQVVVNYPTRNQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ETILRKLVSLLNRQQIYGQLADVILGAIAPLYKSGDSATGLTQPTADPPAPVPTPVVPPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPAPSPAPESVNYKQTMAFNIDELPIPKPAKSMDLDFSENQTLALDPETQMTQTMLLN
CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHC
TGPPRPMPAPAPAPVPKKKHFAAALNIYELKLEVMKYANPLRTKILLFSVVHHPFDLSGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
DWSMLRTCDFDELLSEVLRDASSLKALEIKLSAIARSLFDANEHLQAAGAIVQAVTTFTN
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPVHDL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA