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The map label for this gene is yjcF [C]

Identifier: 170077836

GI number: 170077836

Start: 1264355

End: 1265347

Strand: Reverse

Name: yjcF [C]

Synonym: SYNPCC7002_A1220

Alternate gene names: 170077836

Gene position: 1265347-1264355 (Counterclockwise)

Preceding gene: 170077837

Following gene: 170077835

Centisome position: 42.07

GC content: 51.66

Gene sequence:

>993_bases
ATGACCCCCCAAGAACTCATTGCTAAATATGCGCTTGGAGAAACCCATTTCCCAGAAGCCCAACTCGATGGCGCGAACTT
TTGGGGGGCAGATCTCATCGGCATTAATCTCCAGGATGCTGACCTCCACAACGCAATTTTGATTTTTGCCTATCTCAGCC
GGGCCAATCTAAAACAAGCCAATTTCATTAATGCCAACCTCAGCGGCGCTAACCTCAACCAAGCCAATTTAACCTTGGCA
GAACTTCATAACGCTGATCTCCATGGTGCTGTTTTAATTGGTGCTAACTTAACCAACGCCGACCTGACCCTGGCAAATTT
ACTCGATGCCAACCTGATGGGAGCAGATCTCCGGGGGGCAGACCTAAGCGGGGCGAATCTTTCTGGGGTCTGTTTGCGGG
AAGCCAATCTTCGGGAAGAAAAGCGAGTTTATAATTCCAGTCTGCGGGGCACCATCCTCCGGAAAGCCGATCTACAGGGG
GCGAACCTCCAAGGTGCCGACCTCGCCCGGGGCGAATTAAGTGGTGCCAACCTCAAGGGTGTTAATTTCCGACGGGCCGA
TCTCCATGAAGCCGATCTCAGTGGGGCCAACTTAGAAAACGCGATCTTGACCGAAGCGAATTTGATTGGGGCCAACCTTG
TCAAAGCTAATCTCAAAAATGCGAAATTTGAGCGGGCGTTAATGGAGGATGCTGATCTTCGCCTAGCCAATCTTACCTGG
GCTAATCTTCCCGGTGCCCGCCTCAATCGCGCCAAACTCAATAAAGCCAATTTGACCAATGCCCGTCTCAACCGTGCGGA
TCTCAGTCGCACCAACCTCTCCCAGGCCAAATTAATCGATGCTGAAATGATTGATACTTACCTTGCCCGCGCCAATCTGA
TGGGAGCAGATTTAACCCGGGCGAACCTGATCCGTGCTGAAATTAGCAGTACAAATCTTGCTGGGGTCATTCTGACTGGG
GCGATGATGCCCGATGGCTCTGAACACCGCTAG

Upstream 100 bases:

>100_bases
CGATCGCCCGGTCACTCTTTGACGCCAACGAACATCTCCAAGCCGCCGGAGCCATTGTTCAAGCCGTGACGACTTTCACC
AATCCCCCCGTCCATGACCT

Downstream 100 bases:

>100_bases
ACCAACGATTAATCTACACCAACCCATAAAAAAACCAGCCTAAGCTTCAGGGCTGGTCAGTTTGAGCTTGCTGTATGAGA
GGAGAAACTCAATGTCAAGA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTPQELIAKYALGETHFPEAQLDGANFWGADLIGINLQDADLHNAILIFAYLSRANLKQANFINANLSGANLNQANLTLA
ELHNADLHGAVLIGANLTNADLTLANLLDANLMGADLRGADLSGANLSGVCLREANLREEKRVYNSSLRGTILRKADLQG
ANLQGADLARGELSGANLKGVNFRRADLHEADLSGANLENAILTEANLIGANLVKANLKNAKFERALMEDADLRLANLTW
ANLPGARLNRAKLNKANLTNARLNRADLSRTNLSQAKLIDAEMIDTYLARANLMGADLTRANLIRAEISSTNLAGVILTG
AMMPDGSEHR

Sequences:

>Translated_330_residues
MTPQELIAKYALGETHFPEAQLDGANFWGADLIGINLQDADLHNAILIFAYLSRANLKQANFINANLSGANLNQANLTLA
ELHNADLHGAVLIGANLTNADLTLANLLDANLMGADLRGADLSGANLSGVCLREANLREEKRVYNSSLRGTILRKADLQG
ANLQGADLARGELSGANLKGVNFRRADLHEADLSGANLENAILTEANLIGANLVKANLKNAKFERALMEDADLRLANLTW
ANLPGARLNRAKLNKANLTNARLNRADLSRTNLSQAKLIDAEMIDTYLARANLMGADLTRANLIRAEISSTNLAGVILTG
AMMPDGSEHR
>Mature_329_residues
TPQELIAKYALGETHFPEAQLDGANFWGADLIGINLQDADLHNAILIFAYLSRANLKQANFINANLSGANLNQANLTLAE
LHNADLHGAVLIGANLTNADLTLANLLDANLMGADLRGADLSGANLSGVCLREANLREEKRVYNSSLRGTILRKADLQGA
NLQGADLARGELSGANLKGVNFRRADLHEADLSGANLENAILTEANLIGANLVKANLKNAKFERALMEDADLRLANLTWA
NLPGARLNRAKLNKANLTNARLNRADLSRTNLSQAKLIDAEMIDTYLARANLMGADLTRANLIRAEISSTNLAGVILTGA
MMPDGSEHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=177, Percent_Identity=35.0282485875706, Blast_Score=83, Evalue=5e-16,
Organism=Escherichia coli, GI1790502, Length=251, Percent_Identity=25.8964143426295, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221377802, Length=153, Percent_Identity=37.9084967320261, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 35373; Mature: 35241

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQELIAKYALGETHFPEAQLDGANFWGADLIGINLQDADLHNAILIFAYLSRANLKQA
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEHHHHCCCCCC
NFINANLSGANLNQANLTLAELHNADLHGAVLIGANLTNADLTLANLLDANLMGADLRGA
EEEECCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCHHCCCCCCCC
DLSGANLSGVCLREANLREEKRVYNSSLRGTILRKADLQGANLQGADLARGELSGANLKG
CCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
VNFRRADLHEADLSGANLENAILTEANLIGANLVKANLKNAKFERALMEDADLRLANLTW
CCEECCCCCCCCCCCCCCCHHHEEHHHHHCHHHHHHHHCHHHHHHHHHHCCCCEEEEEEE
ANLPGARLNRAKLNKANLTNARLNRADLSRTNLSQAKLIDAEMIDTYLARANLMGADLTR
CCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
ANLIRAEISSTNLAGVILTGAMMPDGSEHR
HHHEEEECCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TPQELIAKYALGETHFPEAQLDGANFWGADLIGINLQDADLHNAILIFAYLSRANLKQA
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEHHHHCCCCCC
NFINANLSGANLNQANLTLAELHNADLHGAVLIGANLTNADLTLANLLDANLMGADLRGA
EEEECCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCHHCCCCCCCC
DLSGANLSGVCLREANLREEKRVYNSSLRGTILRKADLQGANLQGADLARGELSGANLKG
CCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
VNFRRADLHEADLSGANLENAILTEANLIGANLVKANLKNAKFERALMEDADLRLANLTW
CCEECCCCCCCCCCCCCCCHHHEEHHHHHCHHHHHHHHCHHHHHHHHHHCCCCEEEEEEE
ANLPGARLNRAKLNKANLTNARLNRADLSRTNLSQAKLIDAEMIDTYLARANLMGADLTR
CCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
ANLIRAEISSTNLAGVILTGAMMPDGSEHR
HHHEEEECCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]