| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077822
Identifier: 170077822
GI number: 170077822
Start: 1250041
End: 1250469
Strand: Reverse
Name: 170077822
Synonym: SYNPCC7002_A1205
Alternate gene names: NA
Gene position: 1250469-1250041 (Counterclockwise)
Preceding gene: 170077823
Following gene: 170077821
Centisome position: 41.57
GC content: 46.62
Gene sequence:
>429_bases ATGGCGAATCGCTACCCGACACAGATCAACGCCCTTTGGATAGCTTTTCTTTTGGGAACCTTGTTTCATACGGACTTGGG ATTGATGCCTCTGTTCCATGACCAGGCGGTGGAGCATTCCCATGCTGGAGGCAACCTAGATCTCGTTTTCGGGTTTATGC TTTTTTTCTTCGCCATCCCCATGGTGTTGATCATTTTGACGACTTTCACCAACAGTAAAGGGTTTCGGCGACTACATTTT TTGGTGACTTCATTATATTCAGTGCTAAATGTGGGCCATTTGATCGCAGACATTGTGGTGCAAGCTCCCTGGTATCAGCT TGTGTTGATGACGTTACTCCTGGGGATTGGTATTTTGCTGAATTTGGTGTCGTACCAGTGGCTCCAAAAACGTTACCATC GGATCAGAAAAACAATTCCTGCCGCCTAG
Upstream 100 bases:
>100_bases TGGAATTAGCCCCTGCGTAATGTTTGGTAAATGCTCCCTTGGCTAGGTTGGTGCGGCAGTGCTATGACTGAGGCAAGTGG CCATGGTGGAGCTTAGGATA
Downstream 100 bases:
>100_bases GGTTTTTGTATTATGAGCGGCGATTGTGCAGTGTAATCAATGAAAATTTTATGTATTCACGGCCTCAGCCGGACGCCCTT TTCTCTCCTGGGGTTAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MANRYPTQINALWIAFLLGTLFHTDLGLMPLFHDQAVEHSHAGGNLDLVFGFMLFFFAIPMVLIILTTFTNSKGFRRLHF LVTSLYSVLNVGHLIADIVVQAPWYQLVLMTLLLGIGILLNLVSYQWLQKRYHRIRKTIPAA
Sequences:
>Translated_142_residues MANRYPTQINALWIAFLLGTLFHTDLGLMPLFHDQAVEHSHAGGNLDLVFGFMLFFFAIPMVLIILTTFTNSKGFRRLHF LVTSLYSVLNVGHLIADIVVQAPWYQLVLMTLLLGIGILLNLVSYQWLQKRYHRIRKTIPAA >Mature_141_residues ANRYPTQINALWIAFLLGTLFHTDLGLMPLFHDQAVEHSHAGGNLDLVFGFMLFFFAIPMVLIILTTFTNSKGFRRLHFL VTSLYSVLNVGHLIADIVVQAPWYQLVLMTLLLGIGILLNLVSYQWLQKRYHRIRKTIPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16226; Mature: 16094
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRYPTQINALWIAFLLGTLFHTDLGLMPLFHDQAVEHSHAGGNLDLVFGFMLFFFAIP CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MVLIILTTFTNSKGFRRLHFLVTSLYSVLNVGHLIADIVVQAPWYQLVLMTLLLGIGILL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NLVSYQWLQKRYHRIRKTIPAA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ANRYPTQINALWIAFLLGTLFHTDLGLMPLFHDQAVEHSHAGGNLDLVFGFMLFFFAIP CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MVLIILTTFTNSKGFRRLHFLVTSLYSVLNVGHLIADIVVQAPWYQLVLMTLLLGIGILL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NLVSYQWLQKRYHRIRKTIPAA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA