| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077816
Identifier: 170077816
GI number: 170077816
Start: 1242710
End: 1243246
Strand: Reverse
Name: 170077816
Synonym: SYNPCC7002_A1199
Alternate gene names: NA
Gene position: 1243246-1242710 (Counterclockwise)
Preceding gene: 170077819
Following gene: 170077814
Centisome position: 41.33
GC content: 50.84
Gene sequence:
>537_bases ATGGTTGAATCTAGCTTACATTACCCTATTTTTGGTGCTGAAATTCCCTGTCCCCATTGTCGTCAAATGATTCCAGCGTT AACTTTGACGGATAGTTATCTCTGCGATCGCCATGGTGCTTTTGAAGCAGATCCAGAAACAGAAATCTTGGTACACCTTC AATCCAGTCGCCAATGGAAGCGCTGGGAGGAAAAATGGTACCGCCAACATACCCATCCCGATGGCATTCGCTTTGAGATC CATGAAGCCCTCGATCGCCTTTACACCCAGGGGTTACGGGCTACCAAAATTACCATCGCCCAACGCTACCAAACTTTAAT GCGGCGCACCCTCGATTTTAAATCGGCCCCTGGACGGGGAGACATAACCTCAACGGACTATGCGGTCACCCCTTCAGTGC CCCACCTATACGGTCTGCCTGTGTTTTTTCATGATGCTGGCGATCGCCAAGACCGCTGGCAGATTGTCAACTTCGAGCTT GAAACCGAACCCGGCTCCCCCCGGCGTTATCCCTACCATTACCTGAGCCGAGAATAA
Upstream 100 bases:
>100_bases ATAGCTCACTGAAGCGAATAAAAATCTCCGATATAATGAACACAACTTTGAGGACGGCACAGCAAAATTTTTTTATTCCA ACTATACCGACACAAGTGCA
Downstream 100 bases:
>100_bases TCCCCATCAAACCCTTATTTTTGACCGGATTCTAGACCCTGGGGCATCAGCTCACTCAAATCAAACTTTTTCAACTGATT GGCAAATTGGGGCAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVESSLHYPIFGAEIPCPHCRQMIPALTLTDSYLCDRHGAFEADPETEILVHLQSSRQWKRWEEKWYRQHTHPDGIRFEI HEALDRLYTQGLRATKITIAQRYQTLMRRTLDFKSAPGRGDITSTDYAVTPSVPHLYGLPVFFHDAGDRQDRWQIVNFEL ETEPGSPRRYPYHYLSRE
Sequences:
>Translated_178_residues MVESSLHYPIFGAEIPCPHCRQMIPALTLTDSYLCDRHGAFEADPETEILVHLQSSRQWKRWEEKWYRQHTHPDGIRFEI HEALDRLYTQGLRATKITIAQRYQTLMRRTLDFKSAPGRGDITSTDYAVTPSVPHLYGLPVFFHDAGDRQDRWQIVNFEL ETEPGSPRRYPYHYLSRE >Mature_178_residues MVESSLHYPIFGAEIPCPHCRQMIPALTLTDSYLCDRHGAFEADPETEILVHLQSSRQWKRWEEKWYRQHTHPDGIRFEI HEALDRLYTQGLRATKITIAQRYQTLMRRTLDFKSAPGRGDITSTDYAVTPSVPHLYGLPVFFHDAGDRQDRWQIVNFEL ETEPGSPRRYPYHYLSRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20975; Mature: 20975
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESSLHYPIFGAEIPCPHCRQMIPALTLTDSYLCDRHGAFEADPETEILVHLQSSRQWK CCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHH RWEEKWYRQHTHPDGIRFEIHEALDRLYTQGLRATKITIAQRYQTLMRRTLDFKSAPGRG HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC DITSTDYAVTPSVPHLYGLPVFFHDAGDRQDRWQIVNFELETEPGSPRRYPYHYLSRE CCCCCCEEECCCCCCHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MVESSLHYPIFGAEIPCPHCRQMIPALTLTDSYLCDRHGAFEADPETEILVHLQSSRQWK CCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHH RWEEKWYRQHTHPDGIRFEIHEALDRLYTQGLRATKITIAQRYQTLMRRTLDFKSAPGRG HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC DITSTDYAVTPSVPHLYGLPVFFHDAGDRQDRWQIVNFELETEPGSPRRYPYHYLSRE CCCCCCEEECCCCCCHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA