Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077796

Identifier: 170077796

GI number: 170077796

Start: 1220967

End: 1221605

Strand: Reverse

Name: 170077796

Synonym: SYNPCC7002_A1179

Alternate gene names: NA

Gene position: 1221605-1220967 (Counterclockwise)

Preceding gene: 170077797

Following gene: 170077793

Centisome position: 40.61

GC content: 47.57

Gene sequence:

>639_bases
ATGAAATCTAAATTTTTACTTTTTTTGAGTGTCGCAACGCTTCAGGCTGCTCTATTCGGCTGCGGACTCGTTGGCAATAA
TACGTCCGGTGAGCAAAATACTTCAGGTACAGAAGAAACAACCAGTGAATCAACCGCGACGAATGAGTCAACCAACGTCA
CGGCAGATTGGGTTGATTTTCAAACGGAAAATGGCAAACTCGCAGTTAAATTTCCAGGTACGCCTCAAACGGAAAGTCAA
ACGACCCCCTCTGATCTGGGTGAACTACAGTTCACAATGACTTCCTACGCGGACGACGCCAATACGCAATTTTTTATGGT
GAGTAGTGTTACGTATCCGGTTTCTCCTGATCAATATGATGCGGCCCAGGGACTTGAAGCGGCCAAGGAAGGGGCGGCCA
GCAACTCAGGTTCGACAATTGTTTCTGATGAGCCAAGTGATAAGTTTGGGATTCCGGGGAAAAAATTGGTGATGAACGCC
GCCCAGGATAATGGCGAAGTTTATACCACCCGCGCTGAAATCTACATCGATCCCAACGGCCCCACCCTCCACCAAATTTT
GATGGTGACGGAAGGCGATCGCGTGGATAGTCCAGAAGCCAACGCATTTTTTGATTCCGTCAATATTACGCCTATCTAA

Upstream 100 bases:

>100_bases
AATGTTTAGGATTGCAGAAAGCAGCCCATCGTTTTGTGCCTCGTTATTTTTGGCATGGAGGAGGTCACGGGCTCAATTTA
AAATGTTGGTCTAAAATTTT

Downstream 100 bases:

>100_bases
ACTTTTCGGTTGGTAAAAAAAGCCTGATATAGCAATAGCCCCGATGAATCAACACCAGGGCTATTTTTTTATGGTCTTTT
TATGGCCAAAATTTAAAGGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKSKFLLFLSVATLQAALFGCGLVGNNTSGEQNTSGTEETTSESTATNESTNVTADWVDFQTENGKLAVKFPGTPQTESQ
TTPSDLGELQFTMTSYADDANTQFFMVSSVTYPVSPDQYDAAQGLEAAKEGAASNSGSTIVSDEPSDKFGIPGKKLVMNA
AQDNGEVYTTRAEIYIDPNGPTLHQILMVTEGDRVDSPEANAFFDSVNITPI

Sequences:

>Translated_212_residues
MKSKFLLFLSVATLQAALFGCGLVGNNTSGEQNTSGTEETTSESTATNESTNVTADWVDFQTENGKLAVKFPGTPQTESQ
TTPSDLGELQFTMTSYADDANTQFFMVSSVTYPVSPDQYDAAQGLEAAKEGAASNSGSTIVSDEPSDKFGIPGKKLVMNA
AQDNGEVYTTRAEIYIDPNGPTLHQILMVTEGDRVDSPEANAFFDSVNITPI
>Mature_212_residues
MKSKFLLFLSVATLQAALFGCGLVGNNTSGEQNTSGTEETTSESTATNESTNVTADWVDFQTENGKLAVKFPGTPQTESQ
TTPSDLGELQFTMTSYADDANTQFFMVSSVTYPVSPDQYDAAQGLEAAKEGAASNSGSTIVSDEPSDKFGIPGKKLVMNA
AQDNGEVYTTRAEIYIDPNGPTLHQILMVTEGDRVDSPEANAFFDSVNITPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22566; Mature: 22566

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKFLLFLSVATLQAALFGCGLVGNNTSGEQNTSGTEETTSESTATNESTNVTADWVDF
CCCEEEEEEEHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
QTENGKLAVKFPGTPQTESQTTPSDLGELQFTMTSYADDANTQFFMVSSVTYPVSPDQYD
EECCCEEEEECCCCCCCCCCCCCCHHCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCC
AAQGLEAAKEGAASNSGSTIVSDEPSDKFGIPGKKLVMNAAQDNGEVYTTRAEIYIDPNG
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHEEEECCCCCCEEEEEEEEEEECCCC
PTLHQILMVTEGDRVDSPEANAFFDSVNITPI
CCEEEEEEEECCCCCCCCCCCEEEECEEECCC
>Mature Secondary Structure
MKSKFLLFLSVATLQAALFGCGLVGNNTSGEQNTSGTEETTSESTATNESTNVTADWVDF
CCCEEEEEEEHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
QTENGKLAVKFPGTPQTESQTTPSDLGELQFTMTSYADDANTQFFMVSSVTYPVSPDQYD
EECCCEEEEECCCCCCCCCCCCCCHHCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCC
AAQGLEAAKEGAASNSGSTIVSDEPSDKFGIPGKKLVMNAAQDNGEVYTTRAEIYIDPNG
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHEEEECCCCCCEEEEEEEEEEECCCC
PTLHQILMVTEGDRVDSPEANAFFDSVNITPI
CCEEEEEEEECCCCCCCCCCCEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA