| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077785
Identifier: 170077785
GI number: 170077785
Start: 1199867
End: 1200400
Strand: Direct
Name: 170077785
Synonym: SYNPCC7002_A1168
Alternate gene names: NA
Gene position: 1199867-1200400 (Clockwise)
Preceding gene: 170077784
Following gene: 170077786
Centisome position: 39.89
GC content: 53.37
Gene sequence:
>534_bases ATGAGCCTTGCTTGCATCGGCCGACAGCATTTAAGTCACTTGGCGATCGCCACGACTTTACTAACAGGACTCACTGGCGC GATTTACCAATCCACAGCCCAGGCCCAGGCCGCCTATGGTAGCTATGTGGGTGCTGGGGCGAGCGTTGGCGTTTCCTCCG ACTGGAACGGCGAAGGTCAACAACTCAGTGCTGTTTTGGCGGCCCGCTATAAGTTTCTGAAATTACCTATTTCCCTCCGG ACCCAAGCCTTTATCGGTTCTGGTAGTACCGCCATTGTGCCGACCATTTCCTATGATGTGCCCCTAACCTGGCAACTCGA TGCCTATGTGGGTGCTGGTTATTCCTTCGCAACCGGAAACAACCCTTCCCCCGTCGGCGATCGAAACACCTTGGTGATTC AACCGGGACTTGATTATGCACTGCCCAATGGCAACACGGTGCTCTTTACCAATGCGGTGTTTGCCTTTGATGCCTATGAA GGTAAAAATGAAAAGGCCGTTGCGCTCCAAGGAGGGTTAGGTCTCCGCTTCTAA
Upstream 100 bases:
>100_bases CCTTTGCGCCCCCGAAACTCTGTGGTAGAAAGCTAAAATTTACCTTAAAATAGCAGCAATTCTGGACAATTTCCGTTCCC TGGTTTTGAGGAGTATAAAC
Downstream 100 bases:
>100_bases ACGGCAACCCGTGGCTTTAAAAAAGTACAATTGAACCGTATGTTAGGCGATCGCCAACCGAGACGAAATGAATAGTTGTG TATTAATGGCGCGCATCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSLACIGRQHLSHLAIATTLLTGLTGAIYQSTAQAQAAYGSYVGAGASVGVSSDWNGEGQQLSAVLAARYKFLKLPISLR TQAFIGSGSTAIVPTISYDVPLTWQLDAYVGAGYSFATGNNPSPVGDRNTLVIQPGLDYALPNGNTVLFTNAVFAFDAYE GKNEKAVALQGGLGLRF
Sequences:
>Translated_177_residues MSLACIGRQHLSHLAIATTLLTGLTGAIYQSTAQAQAAYGSYVGAGASVGVSSDWNGEGQQLSAVLAARYKFLKLPISLR TQAFIGSGSTAIVPTISYDVPLTWQLDAYVGAGYSFATGNNPSPVGDRNTLVIQPGLDYALPNGNTVLFTNAVFAFDAYE GKNEKAVALQGGLGLRF >Mature_176_residues SLACIGRQHLSHLAIATTLLTGLTGAIYQSTAQAQAAYGSYVGAGASVGVSSDWNGEGQQLSAVLAARYKFLKLPISLRT QAFIGSGSTAIVPTISYDVPLTWQLDAYVGAGYSFATGNNPSPVGDRNTLVIQPGLDYALPNGNTVLFTNAVFAFDAYEG KNEKAVALQGGLGLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18439; Mature: 18308
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLACIGRQHLSHLAIATTLLTGLTGAIYQSTAQAQAAYGSYVGAGASVGVSSDWNGEGQ CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH QLSAVLAARYKFLKLPISLRTQAFIGSGSTAIVPTISYDVPLTWQLDAYVGAGYSFATGN HHHHHHHHHHHEEECCCCCCEEEEECCCCEEEEEEEECCCCEEEEECCEEECCEEECCCC NPSPVGDRNTLVIQPGLDYALPNGNTVLFTNAVFAFDAYEGKNEKAVALQGGLGLRF CCCCCCCCCEEEEECCCCEECCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SLACIGRQHLSHLAIATTLLTGLTGAIYQSTAQAQAAYGSYVGAGASVGVSSDWNGEGQ CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH QLSAVLAARYKFLKLPISLRTQAFIGSGSTAIVPTISYDVPLTWQLDAYVGAGYSFATGN HHHHHHHHHHHEEECCCCCCEEEEECCCCEEEEEEEECCCCEEEEECCEEECCEEECCCC NPSPVGDRNTLVIQPGLDYALPNGNTVLFTNAVFAFDAYEGKNEKAVALQGGLGLRF CCCCCCCCCEEEEECCCCEECCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA