| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077784
Identifier: 170077784
GI number: 170077784
Start: 1198123
End: 1199703
Strand: Direct
Name: 170077784
Synonym: SYNPCC7002_A1167
Alternate gene names: NA
Gene position: 1198123-1199703 (Clockwise)
Preceding gene: 170077781
Following gene: 170077785
Centisome position: 39.83
GC content: 51.3
Gene sequence:
>1581_bases ATGAGGCAAGGCTGGCACAGTTTAATCCTGGGGAGTTTACTGCTGGGCACAGGCGGATCGGCACTGCTCTCACCTGTCCT AATACCTCCAACCTTTGCCCAAGAAGCCACCTCCACTACCCAAGGGCGTTCATTCCTTGCGGAGTTGTGGTTATTGAACC AAGGTTTTGTTGGTCTCCGGCCTGACCTAGAAGAATTCCCTGACAATTTGGCGGCGCTCAACACTGGGACAGCGGCTTTC GATGCAGAAATTTTTCGGAATGATCGGGCTGGCCTGCAACAACTCCAAGAACAGATCCGGTTGCTGGAAGGGCAACTGGC AACGATTCAAGACCCGGCCCAACGGGAAGCTTTAGCAACGGCGATCGCCAACCTTGATCAGCAGCTCAATAATCTCGCCA ACCTGATTGAACCCTTTGCAGAGGGCTTTAATCCGGAAACAATCCGGCGGCTCCAGGAATTTTTAGATTTTTTTGAACGG CGCAACCTCAGTGAAGCGGACTATGGTTTCTACGGTAGCGTCACCCAAACAGAGCTCGAAGAATACCTTGCACAACAGTT AAGTGACCTCAGCGAAACCCTCAAAACCCTGAATGAAACCTCAACCCAAGGGGCGATCGCCCCGGATCTGGTCACCTCGA TTGATTATCTCTACACGAGCCTAAGCCTGGAAAATACCGTTGTGGATGATGGCACGACTTTTTCGGCAATGATCCAAACC CTCCAGCGGGATAATCAGCGCCTGCGACAACGCCTGCGTACCACCAATTTTCTCCTGGGGCTGCTCCTTCTGTTAGGCAC CGCGACCCTCGCCCTGTTTTATCTACGGAAACCGACCCCAGCAGCTTCGCCTGTCAATCGCTATTTTCCGGATGCGGAAC CGGATTCCTTTGATCTCGATCGGCTAGAAGCAAAGCTTATCAAGCGACTCCAAAACACCTACGATCTTTCGCCCAAGGAA AATTTTGCGGCGATCGCCCCGCCACCAGTCACAACCCAACCCACCACTATTCCCTTCAGCGAAACACCGCCTTCACAGCC CCTAGCCGCGAACACCCTAGACGACCTAGAGGCATTCAATCCAGCTTCACAAACGCTCGATCACCTAGAGCCGAATCCTG TGGAAACAGAAATCAATGCAGACACAGACGCTGATTTTCCGGTGCAATTTCTCAATGCCTACGATGCCCTGGTGGAAACC TATAATGCCGATGCCATGGGCTTGGCCCCAGAGGCGATCGCCTTGGCTGTCCAACCGCCTGTGACCTCGGCCCTCGAAAC TGACGGAAAAACTGAAAATTTCCTGAGCGGGTTATTATTCCAAACCGATGACCAAGGGGACTATTGGGCCATCGAAGTGC AAAATCAGTATTACCTTGTGCCCCGCGCCCAGCTTAAAATCACCCCCGATAACTACACTTTTTTCCAGCAAACTTTTATC TGCTACGGTAACCAAAAGCCAGATTTACAGACGATTAAATTACTCAAACCCGCTCGCATTGCCACCACAGATCAAGACAA TCTTTGGGAATTGGTTCAACCGGGCATTGTTGTTTTAGAAAACGTTGAATCTTTAGCCTAA
Upstream 100 bases:
>100_bases TCTGGGGGAAAGCTGCCTTAGAATCACCTTAAGTAAGTTCACACATTCTGAGCACAATTTTTTTGGTTCAAGAATCCTAT CGCAGGAAAAAAGTATGGCA
Downstream 100 bases:
>100_bases GTTTTAGACGAAATCATTTGGACAAATAATATTTACTCAACCTAGTAACGGCCCCTAATAAGTCCTTTGCGCCCCCGAAA CTCTGTGGTAGAAAGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MRQGWHSLILGSLLLGTGGSALLSPVLIPPTFAQEATSTTQGRSFLAELWLLNQGFVGLRPDLEEFPDNLAALNTGTAAF DAEIFRNDRAGLQQLQEQIRLLEGQLATIQDPAQREALATAIANLDQQLNNLANLIEPFAEGFNPETIRRLQEFLDFFER RNLSEADYGFYGSVTQTELEEYLAQQLSDLSETLKTLNETSTQGAIAPDLVTSIDYLYTSLSLENTVVDDGTTFSAMIQT LQRDNQRLRQRLRTTNFLLGLLLLLGTATLALFYLRKPTPAASPVNRYFPDAEPDSFDLDRLEAKLIKRLQNTYDLSPKE NFAAIAPPPVTTQPTTIPFSETPPSQPLAANTLDDLEAFNPASQTLDHLEPNPVETEINADTDADFPVQFLNAYDALVET YNADAMGLAPEAIALAVQPPVTSALETDGKTENFLSGLLFQTDDQGDYWAIEVQNQYYLVPRAQLKITPDNYTFFQQTFI CYGNQKPDLQTIKLLKPARIATTDQDNLWELVQPGIVVLENVESLA
Sequences:
>Translated_526_residues MRQGWHSLILGSLLLGTGGSALLSPVLIPPTFAQEATSTTQGRSFLAELWLLNQGFVGLRPDLEEFPDNLAALNTGTAAF DAEIFRNDRAGLQQLQEQIRLLEGQLATIQDPAQREALATAIANLDQQLNNLANLIEPFAEGFNPETIRRLQEFLDFFER RNLSEADYGFYGSVTQTELEEYLAQQLSDLSETLKTLNETSTQGAIAPDLVTSIDYLYTSLSLENTVVDDGTTFSAMIQT LQRDNQRLRQRLRTTNFLLGLLLLLGTATLALFYLRKPTPAASPVNRYFPDAEPDSFDLDRLEAKLIKRLQNTYDLSPKE NFAAIAPPPVTTQPTTIPFSETPPSQPLAANTLDDLEAFNPASQTLDHLEPNPVETEINADTDADFPVQFLNAYDALVET YNADAMGLAPEAIALAVQPPVTSALETDGKTENFLSGLLFQTDDQGDYWAIEVQNQYYLVPRAQLKITPDNYTFFQQTFI CYGNQKPDLQTIKLLKPARIATTDQDNLWELVQPGIVVLENVESLA >Mature_526_residues MRQGWHSLILGSLLLGTGGSALLSPVLIPPTFAQEATSTTQGRSFLAELWLLNQGFVGLRPDLEEFPDNLAALNTGTAAF DAEIFRNDRAGLQQLQEQIRLLEGQLATIQDPAQREALATAIANLDQQLNNLANLIEPFAEGFNPETIRRLQEFLDFFER RNLSEADYGFYGSVTQTELEEYLAQQLSDLSETLKTLNETSTQGAIAPDLVTSIDYLYTSLSLENTVVDDGTTFSAMIQT LQRDNQRLRQRLRTTNFLLGLLLLLGTATLALFYLRKPTPAASPVNRYFPDAEPDSFDLDRLEAKLIKRLQNTYDLSPKE NFAAIAPPPVTTQPTTIPFSETPPSQPLAANTLDDLEAFNPASQTLDHLEPNPVETEINADTDADFPVQFLNAYDALVET YNADAMGLAPEAIALAVQPPVTSALETDGKTENFLSGLLFQTDDQGDYWAIEVQNQYYLVPRAQLKITPDNYTFFQQTFI CYGNQKPDLQTIKLLKPARIATTDQDNLWELVQPGIVVLENVESLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58376; Mature: 58376
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGWHSLILGSLLLGTGGSALLSPVLIPPTFAQEATSTTQGRSFLAELWLLNQGFVGLR CCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCC PDLEEFPDNLAALNTGTAAFDAEIFRNDRAGLQQLQEQIRLLEGQLATIQDPAQREALAT CCHHHCCCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHH AIANLDQQLNNLANLIEPFAEGFNPETIRRLQEFLDFFERRNLSEADYGFYGSVTQTELE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH EYLAQQLSDLSETLKTLNETSTQGAIAPDLVTSIDYLYTSLSLENTVVDDGTTFSAMIQT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH LQRDNQRLRQRLRTTNFLLGLLLLLGTATLALFYLRKPTPAASPVNRYFPDAEPDSFDLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHH RLEAKLIKRLQNTYDLSPKENFAAIAPPPVTTQPTTIPFSETPPSQPLAANTLDDLEAFN HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC PASQTLDHLEPNPVETEINADTDADFPVQFLNAYDALVETYNADAMGLAPEAIALAVQPP CHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCC VTSALETDGKTENFLSGLLFQTDDQGDYWAIEVQNQYYLVPRAQLKITPDNYTFFQQTFI CHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCEEEEEECCEEEECCCCCCHHHHEEE CYGNQKPDLQTIKLLKPARIATTDQDNLWELVQPGIVVLENVESLA EECCCCCCHHHHHHHCCCCEECCCCHHHHHHHCCCHHEEHHHHHCC >Mature Secondary Structure MRQGWHSLILGSLLLGTGGSALLSPVLIPPTFAQEATSTTQGRSFLAELWLLNQGFVGLR CCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCC PDLEEFPDNLAALNTGTAAFDAEIFRNDRAGLQQLQEQIRLLEGQLATIQDPAQREALAT CCHHHCCCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHH AIANLDQQLNNLANLIEPFAEGFNPETIRRLQEFLDFFERRNLSEADYGFYGSVTQTELE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH EYLAQQLSDLSETLKTLNETSTQGAIAPDLVTSIDYLYTSLSLENTVVDDGTTFSAMIQT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH LQRDNQRLRQRLRTTNFLLGLLLLLGTATLALFYLRKPTPAASPVNRYFPDAEPDSFDLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHH RLEAKLIKRLQNTYDLSPKENFAAIAPPPVTTQPTTIPFSETPPSQPLAANTLDDLEAFN HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC PASQTLDHLEPNPVETEINADTDADFPVQFLNAYDALVETYNADAMGLAPEAIALAVQPP CHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCC VTSALETDGKTENFLSGLLFQTDDQGDYWAIEVQNQYYLVPRAQLKITPDNYTFFQQTFI CHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCEEEEEECCEEEECCCCCCHHHHEEE CYGNQKPDLQTIKLLKPARIATTDQDNLWELVQPGIVVLENVESLA EECCCCCCHHHHHHHCCCCEECCCCHHHHHHHCCCHHEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA