| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077773
Identifier: 170077773
GI number: 170077773
Start: 1187887
End: 1188291
Strand: Reverse
Name: 170077773
Synonym: SYNPCC7002_A1155
Alternate gene names: NA
Gene position: 1188291-1187887 (Counterclockwise)
Preceding gene: 170077774
Following gene: 170077769
Centisome position: 39.5
GC content: 50.12
Gene sequence:
>405_bases ATGAAATTTTCTCAAATTAGCGGTGTGGTCAGCGGCTTCGGCGTTGTTGCCCTTGGGGCGATCGCCTACTTAACCAATCC TCCCCTGAGCCAGTATCGCAATTATGCGGGCGAACAGATTGCCATCTATCTCAAGGATAATGTCTGCCAAAATTCGGGTG ATGATCTGCCCCTCGGTTTAGGCAATCTCCAAAGCGATTTGCTGCGCAACTACTGCAAAACCCTAGTGGACGCGAGCCAG GCCCAATTGGGCGAAATCGTCAGTCGGCAAACCAGCGTCAATAATTATTTTTTCTTTAGCATCTACCAAACGGATATCGT TTTGCCGGAGCCCTTTCCACGGTACTCCTTTGAGACGGTGGGCATCTTCCAGCAGTTCTACACCTACCGGGCAGAAAAAA GCTAG
Upstream 100 bases:
>100_bases ATGGCGGAACCACAATCCGCTGCCTTAACCACTTGGCTACGCTCGCCATAATCACGATTAATAATGTTATCGAATTGATT TTATTTTGTCCAGGTTTTTT
Downstream 100 bases:
>100_bases GGGGAGCATTGCGCCCAGGCCTGATGGGAGAGTTTCAAACGGGCGATCGCCTCATCCACCGACCCAACACACACAGGAAT TTCAAAATCCACTGCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKFSQISGVVSGFGVVALGAIAYLTNPPLSQYRNYAGEQIAIYLKDNVCQNSGDDLPLGLGNLQSDLLRNYCKTLVDASQ AQLGEIVSRQTSVNNYFFFSIYQTDIVLPEPFPRYSFETVGIFQQFYTYRAEKS
Sequences:
>Translated_134_residues MKFSQISGVVSGFGVVALGAIAYLTNPPLSQYRNYAGEQIAIYLKDNVCQNSGDDLPLGLGNLQSDLLRNYCKTLVDASQ AQLGEIVSRQTSVNNYFFFSIYQTDIVLPEPFPRYSFETVGIFQQFYTYRAEKS >Mature_134_residues MKFSQISGVVSGFGVVALGAIAYLTNPPLSQYRNYAGEQIAIYLKDNVCQNSGDDLPLGLGNLQSDLLRNYCKTLVDASQ AQLGEIVSRQTSVNNYFFFSIYQTDIVLPEPFPRYSFETVGIFQQFYTYRAEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15005; Mature: 15005
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSQISGVVSGFGVVALGAIAYLTNPPLSQYRNYAGEQIAIYLKDNVCQNSGDDLPLGL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCC GNLQSDLLRNYCKTLVDASQAQLGEIVSRQTSVNNYFFFSIYQTDIVLPEPFPRYSFETV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCHHHH GIFQQFYTYRAEKS HHHHHHHHHHCCCC >Mature Secondary Structure MKFSQISGVVSGFGVVALGAIAYLTNPPLSQYRNYAGEQIAIYLKDNVCQNSGDDLPLGL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCC GNLQSDLLRNYCKTLVDASQAQLGEIVSRQTSVNNYFFFSIYQTDIVLPEPFPRYSFETV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCHHHH GIFQQFYTYRAEKS HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA