| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077770
Identifier: 170077770
GI number: 170077770
Start: 1186075
End: 1186422
Strand: Direct
Name: 170077770
Synonym: SYNPCC7002_A1152
Alternate gene names: NA
Gene position: 1186075-1186422 (Clockwise)
Preceding gene: 170077767
Following gene: 170077771
Centisome position: 39.43
GC content: 50.0
Gene sequence:
>348_bases ATGGCGGATCGGCACACATTAGTTTTATTGGATATTCTCATTTCGGCGCGGCTCGCGATTAATTATCTAGCGGATCTGAG TTGGACGGAGTTCCTCGGCAATATTGTGGTTCAGGATGCGGTGATTCGGCGGATCGAAATTATGGGTCTGGCGGCGCGAA ATATTCCCAAGGTGATGCACCCAGAACTCCCCCAAGTGCCTTGGTTTGAACTAGAGGCGATCGCCAAAACCATGAGTGAA GATTACGAGGCGGTCAATATTGCCTTTGTCTGGGATCTGGTGCGTAATGATCTCCCGGTTTGGGCAGAGGCTTTAGAAGT AATCTTGCCGGAAAATCTCCACGTCTAG
Upstream 100 bases:
>100_bases AACAGCGGCTCCATCAAGTCGATACGATACTTTGTTAAGTGATCATTTTATCCACTATAGCGATTTACTACTCCACCCGG AGCTTATCTCGAGGTTTTCC
Downstream 100 bases:
>100_bases GGATGCTGTTTAAGCCTGTTTCCCATAGCGCCTGGGGCCGAAAGTTGTGGTTTGTGCGCCACGGAAATCGCTTAGATTTC GTGCAACCGGCTTGGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MADRHTLVLLDILISARLAINYLADLSWTEFLGNIVVQDAVIRRIEIMGLAARNIPKVMHPELPQVPWFELEAIAKTMSE DYEAVNIAFVWDLVRNDLPVWAEALEVILPENLHV
Sequences:
>Translated_115_residues MADRHTLVLLDILISARLAINYLADLSWTEFLGNIVVQDAVIRRIEIMGLAARNIPKVMHPELPQVPWFELEAIAKTMSE DYEAVNIAFVWDLVRNDLPVWAEALEVILPENLHV >Mature_114_residues ADRHTLVLLDILISARLAINYLADLSWTEFLGNIVVQDAVIRRIEIMGLAARNIPKVMHPELPQVPWFELEAIAKTMSED YEAVNIAFVWDLVRNDLPVWAEALEVILPENLHV
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13129; Mature: 12997
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRHTLVLLDILISARLAINYLADLSWTEFLGNIVVQDAVIRRIEIMGLAARNIPKVMH CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC PELPQVPWFELEAIAKTMSEDYEAVNIAFVWDLVRNDLPVWAEALEVILPENLHV CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure ADRHTLVLLDILISARLAINYLADLSWTEFLGNIVVQDAVIRRIEIMGLAARNIPKVMH CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC PELPQVPWFELEAIAKTMSEDYEAVNIAFVWDLVRNDLPVWAEALEVILPENLHV CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]