| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077767
Identifier: 170077767
GI number: 170077767
Start: 1183077
End: 1183367
Strand: Direct
Name: 170077767
Synonym: SYNPCC7002_A1149
Alternate gene names: NA
Gene position: 1183077-1183367 (Clockwise)
Preceding gene: 170077764
Following gene: 170077770
Centisome position: 39.33
GC content: 45.02
Gene sequence:
>291_bases ATGGCCACTCCTAAATTTGATGCCCCAGCCACCCACACCAACGCTTGGATTTTTCAAACCTGGTTAGCGTTTATTCTGTC CCTCAGTGCCATGGGGATCGGCATTTATTTGTTGCCCCTCAACGGTTGGATGAAAAGCTACCTGGGCATGGGGTTTGTGT TTTCGATTAGCTCTACCATTAGCCTGGCAAAGACGACTAGGGACTTAGAAGAATCAAAACGAATCTTTAATCGGGTTGAT GAGGCTAAACTCGAGAAATTGTTGGCGGAATATGATCCGTTTAATAAATAG
Upstream 100 bases:
>100_bases ACCTTACTTCTACGGGCTTGGGTTTGCTCATTGCGACTACAGAAAATCTTTCCCGACAATGAAAGTAAGCAACGACAAGT CTTCATTGAGGTTCAAGATC
Downstream 100 bases:
>100_bases GCATTGGTTCCCAAAAAATTGGGGAGAACATGATTGCTCTCCCCGGACTGAAGATATGGGGCGATCGCCTTTATTTTTTC CTTTATTCCACCGTGACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: YiaAB Two Helix Domain Protein; YiaA/B Two Helix Domain Family
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MATPKFDAPATHTNAWIFQTWLAFILSLSAMGIGIYLLPLNGWMKSYLGMGFVFSISSTISLAKTTRDLEESKRIFNRVD EAKLEKLLAEYDPFNK
Sequences:
>Translated_96_residues MATPKFDAPATHTNAWIFQTWLAFILSLSAMGIGIYLLPLNGWMKSYLGMGFVFSISSTISLAKTTRDLEESKRIFNRVD EAKLEKLLAEYDPFNK >Mature_95_residues ATPKFDAPATHTNAWIFQTWLAFILSLSAMGIGIYLLPLNGWMKSYLGMGFVFSISSTISLAKTTRDLEESKRIFNRVDE AKLEKLLAEYDPFNK
Specific function: Unknown
COG id: COG4298
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10881; Mature: 10750
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPKFDAPATHTNAWIFQTWLAFILSLSAMGIGIYLLPLNGWMKSYLGMGFVFSISSTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCHHHHHHHHHH SLAKTTRDLEESKRIFNRVDEAKLEKLLAEYDPFNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ATPKFDAPATHTNAWIFQTWLAFILSLSAMGIGIYLLPLNGWMKSYLGMGFVFSISSTI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCHHHHHHHHHH SLAKTTRDLEESKRIFNRVDEAKLEKLLAEYDPFNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA