| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077766
Identifier: 170077766
GI number: 170077766
Start: 1181917
End: 1182939
Strand: Reverse
Name: 170077766
Synonym: SYNPCC7002_A1148
Alternate gene names: NA
Gene position: 1182939-1181917 (Counterclockwise)
Preceding gene: 170077768
Following gene: 170077765
Centisome position: 39.33
GC content: 51.52
Gene sequence:
>1023_bases ATGATCACCCTCCAGGAGCTTGAGCACTGGTTCCCTGCTACCCAAAAGCAGGCCTTGCTGACCCAGCTAAAGCAGGTGGT GGGCCTCACGCGGGTGCGGGCTGAATATTTTTTGCGTCTTTGGATCTATCTCCTGGTGAAGGCGAAACTAACGCAACAGC CGCAGCTACGGCCCCCCTTAACGGAATTGCAAACTCAATTTGGGGCGGTTATTTGTACCCACCGGGAGGCGGCAGAATTG TTCTATGGCGATCAGGAAAAAGGCGGCGATCGCGCGGCAGGTATGATGCTAGATAAGCTGGCAGCCTTGGGGTTGATTCG CAAATATTTCGATGGCAACACCACCTGCATTGAAATTTTGCCGTTACCGCAACAGGTTTTGAGTGCTGAAACCGACGATG TTGTTTCCCTGACCTTGGCGGAGTTTAATCCCCGCTGTGATGCGATTCCCGTAGCGAATTTGCTCGCGGTAAATTACAAC TGGATGAACAATAATAATGATGCGGTGCCCCACCGGATTGCCAGACTCTTGCGTCAGTGGGGACAACAATATCCCACGGG AATGCGGGTTTTGAGGCGTGTGGATAATCAAAATCCGGTGGGCTTTTATCTGCTCTATCCGACTGCTGCCCATTCTGATG TCAATTTTTTTCGGCCCGCAAAGAAGGCGCTGCACCTCAGTACGATGGCGGCAACTGATCCGTTTACCCTAGCCACCGTG GGCGACGAAACCTGCGTGTCGGTGTTTATTCGCAGTTGGGTGATTGATCCTATGTATTTAACGGCCTATCGACTTACTTT CCTGGTGGATGCCCAGCAAACATTACGAAAAATGCAAGGAGATTTTCCCAATCTTTGTGATCTGCATACTTTAATTATCC ATCCGAGCTATGCTCAACTGGCGACGGCTCTTGGATTTCAGCCGACCCAGCAAGGGGATTTGGGCTCTATCCACTGGATG TACCAAGCTCTGGATCGGTTTTTGGCTCTGGAGATTGCTGAGGCGATCGCCCCCCTTGGGTAA
Upstream 100 bases:
>100_bases TTCATTGTCGGGAAAGATTTTCTGTAGTCGCAATGAGCAAACCCAAGCCCGTAGAAGTAAGGTGAAGTAGGATGAAGTAA TTAGACTTCCAGAGAAAGCC
Downstream 100 bases:
>100_bases AGCGAATCCTTTGCCTTTTCAATTGACGATTGATTATGATCAGTGGGTTCCATTGTGTTTAGGAAGCAACCCCCTGTGAA ACTGGCCTTTATCCTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MITLQELEHWFPATQKQALLTQLKQVVGLTRVRAEYFLRLWIYLLVKAKLTQQPQLRPPLTELQTQFGAVICTHREAAEL FYGDQEKGGDRAAGMMLDKLAALGLIRKYFDGNTTCIEILPLPQQVLSAETDDVVSLTLAEFNPRCDAIPVANLLAVNYN WMNNNNDAVPHRIARLLRQWGQQYPTGMRVLRRVDNQNPVGFYLLYPTAAHSDVNFFRPAKKALHLSTMAATDPFTLATV GDETCVSVFIRSWVIDPMYLTAYRLTFLVDAQQTLRKMQGDFPNLCDLHTLIIHPSYAQLATALGFQPTQQGDLGSIHWM YQALDRFLALEIAEAIAPLG
Sequences:
>Translated_340_residues MITLQELEHWFPATQKQALLTQLKQVVGLTRVRAEYFLRLWIYLLVKAKLTQQPQLRPPLTELQTQFGAVICTHREAAEL FYGDQEKGGDRAAGMMLDKLAALGLIRKYFDGNTTCIEILPLPQQVLSAETDDVVSLTLAEFNPRCDAIPVANLLAVNYN WMNNNNDAVPHRIARLLRQWGQQYPTGMRVLRRVDNQNPVGFYLLYPTAAHSDVNFFRPAKKALHLSTMAATDPFTLATV GDETCVSVFIRSWVIDPMYLTAYRLTFLVDAQQTLRKMQGDFPNLCDLHTLIIHPSYAQLATALGFQPTQQGDLGSIHWM YQALDRFLALEIAEAIAPLG >Mature_340_residues MITLQELEHWFPATQKQALLTQLKQVVGLTRVRAEYFLRLWIYLLVKAKLTQQPQLRPPLTELQTQFGAVICTHREAAEL FYGDQEKGGDRAAGMMLDKLAALGLIRKYFDGNTTCIEILPLPQQVLSAETDDVVSLTLAEFNPRCDAIPVANLLAVNYN WMNNNNDAVPHRIARLLRQWGQQYPTGMRVLRRVDNQNPVGFYLLYPTAAHSDVNFFRPAKKALHLSTMAATDPFTLATV GDETCVSVFIRSWVIDPMYLTAYRLTFLVDAQQTLRKMQGDFPNLCDLHTLIIHPSYAQLATALGFQPTQQGDLGSIHWM YQALDRFLALEIAEAIAPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38420; Mature: 38420
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLQELEHWFPATQKQALLTQLKQVVGLTRVRAEYFLRLWIYLLVKAKLTQQPQLRPPL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TELQTQFGAVICTHREAAELFYGDQEKGGDRAAGMMLDKLAALGLIRKYFDGNTTCIEIL HHHHHHHHHEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE PLPQQVLSAETDDVVSLTLAEFNPRCDAIPVANLLAVNYNWMNNNNDAVPHRIARLLRQW CCCHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH GQQYPTGMRVLRRVDNQNPVGFYLLYPTAAHSDVNFFRPAKKALHLSTMAATDPFTLATV HHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC GDETCVSVFIRSWVIDPMYLTAYRLTFLVDAQQTLRKMQGDFPNLCDLHTLIIHPSYAQL CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHEECCCHHHH ATALGFQPTQQGDLGSIHWMYQALDRFLALEIAEAIAPLG HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITLQELEHWFPATQKQALLTQLKQVVGLTRVRAEYFLRLWIYLLVKAKLTQQPQLRPPL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TELQTQFGAVICTHREAAELFYGDQEKGGDRAAGMMLDKLAALGLIRKYFDGNTTCIEIL HHHHHHHHHEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE PLPQQVLSAETDDVVSLTLAEFNPRCDAIPVANLLAVNYNWMNNNNDAVPHRIARLLRQW CCCHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH GQQYPTGMRVLRRVDNQNPVGFYLLYPTAAHSDVNFFRPAKKALHLSTMAATDPFTLATV HHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC GDETCVSVFIRSWVIDPMYLTAYRLTFLVDAQQTLRKMQGDFPNLCDLHTLIIHPSYAQL CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHEECCCHHHH ATALGFQPTQQGDLGSIHWMYQALDRFLALEIAEAIAPLG HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA