| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077762
Identifier: 170077762
GI number: 170077762
Start: 1177581
End: 1178765
Strand: Reverse
Name: 170077762
Synonym: SYNPCC7002_A1144
Alternate gene names: NA
Gene position: 1178765-1177581 (Counterclockwise)
Preceding gene: 170077765
Following gene: 170077759
Centisome position: 39.19
GC content: 51.31
Gene sequence:
>1185_bases ATGGGGTATTTAAAGCCAGCAGAACTGATCACAAAAAATTTAACAACCCTCTGGCTTCTCAAGGGCCTTGAATCTGCTTG GTTTCCAATTCCGGTCATCGTGCTGTTTTACGAATCCCAGGGTTTATCCATTGCCCAGGCGGTGTTACTCAAGGCGATTT TGTCGGCGGCGATCTTTGTGGGGGAAATTCCGTCGGGTTATTTTGCCGATCAATTTGGCCGCAAAAATAGTCTCGTGCTG GGGGCGAGTTTGTGGTTGGTGGGTTGGCTGATTTATTGCACCCAAGGGAGTTTTAGCTGGTTTGCCTGGGCCGAAATCTT GACAGGGCTTGGCGGTAGTTTAATCTCTGGAGCCGATAGTGCGATCGCCTACGATAGTTTGCTTGCCCTGAATCGAACCG AAAAATATGCAGCCTGGGAAGGAAAAGGAGTCGCAATCATGGGTATTACAGAAGCGGTCTGTGGTCTCATGGGAGCTTGG GTCGCCCAGTGGGATCTGCGCTATCCGTTTTATTTGCAAACTCTCTGCATTGGCGCTTATCTGGGGTTGGCATTGACGCT CCGGGAACCGCCCCAGCAACACCCAGAAAAAACACCGGGCTGGCGTACTTTGTTGCCGCAGATTCGGGCAATTTTTCAGG AAAGGCGATCGCTCCGGTGGCTGCTGCTCTTTTCGGCATCCTTAAGTTGCGGTTCTTTTTTAGTGGTGTGGGTTTCCCAG GAATATCTTGTAGACCGGGGTCTGGGTTTGACCCAACTGGGCTGGTCTTGGTTACTATTCCACGGGGCAATGGCCCTTAT TTCTTGGCGCGTTCACACTTTCGTCCGCTGGTTTTCCTACCGCCGCTTATTTGCGCTGCTGCCCGGATGTATGGCGATCG CCTACATTGCGATGGGCCTGATTGAAAACCTCTGGGGGATTCTATTAATTGTCGTTATTTATCTTGTGCGGGGCTGCAAC ACACCGTTGGTCTTGAGCTATCTCAATGAGCGAATTCCCTCGAACCTACGGGCAACCCTGATTTCCCTGAATAGCTTTGC GTTTCGGTTGCTGTTTATCGGGCTGGCGGCGATCGCCAATGGGGCAACGTGGCTTTGGGGGCTTAACGGCAGCTTAATTG TTGTCGGCATTGTGGTGGGCGTAACTTCTTTGTACGGTTATTTAAAATTACGCCCGGCTCTCTAA
Upstream 100 bases:
>100_bases TCTTAATCGCCGGCGGGTACAAGGGCTGAGCGATTGAGGCGAGCAATATCAATCGGAGTTTCGCAACACCTAGTAAAACC AATGGTGTCTTTAACAAAAC
Downstream 100 bases:
>100_bases CTAAACCAAGAGGTCAGCCAGGGGCTTAAAGGAAAATTGGCGATCGCCACCCATTTCCACGACCACTTTAATCTGAGGAT TGTCTTGGGTCAGGCTCACA
Product: MFS family transporter
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MDR-Like Permease; Multidrug Efflux Protein Variant; MFS Family Transporter
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVL GASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAW VAQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCN TPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL
Sequences:
>Translated_394_residues MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVL GASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAW VAQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCN TPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL >Mature_393_residues GYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVLG ASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWV AQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQE YLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCNT PLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43727; Mature: 43596
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GEIPSGYFADQFGRKNSLVLGASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADS HCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCH AIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWVAQWDLRYPFYLQTLCIGAY HHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECH EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENLWGILLIVVIYLVRGCNTPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIAN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL CCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure GYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GEIPSGYFADQFGRKNSLVLGASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADS HCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCH AIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWVAQWDLRYPFYLQTLCIGAY HHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECH EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENLWGILLIVVIYLVRGCNTPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIAN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL CCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA