Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077755

Identifier: 170077755

GI number: 170077755

Start: 1169466

End: 1170611

Strand: Reverse

Name: 170077755

Synonym: SYNPCC7002_A1137

Alternate gene names: NA

Gene position: 1170611-1169466 (Counterclockwise)

Preceding gene: 170077756

Following gene: 170077754

Centisome position: 38.92

GC content: 32.46

Gene sequence:

>1146_bases
ATGAAAATATTTTTCCTGGATTTAATCAAAGTTGTAGATAAGAGCTTTCACTCTTTCTTTAAGAATGCTCTATCTATGAT
TTATGCTCCGACTAAAATTTTAGACTACAAAAACTGTAGTGATTATATTCAAACATTCTCTGTGAACCTTGATAAAAATG
AATATTTAGTTGTAAGTATTAATGGTGGTCGAGTGTTTACAGATCGTCTTACAAATATTACTTTTATTTCACGAAAATAC
TTGTGTCCCTGTGTATCATGGCAATATTTGGGTACTTATTTGTCAAGTAACGGTTTAGAGAGAAAAATTTTATCAGATCA
TGAGAACTTCGTTCTCAACAGAAAGATTTTAATTGATTGCTTCCCAACAAAAATAAATAGTACTGTTATTAGTCTACTTA
CAGGTGGAGCTGCCAACAATAATTATTTTCATTGGCTTTTTGACACTCTACCTAGAATATACATGGTAAAAGTAGCTATT
GATAAACTAGATGATCATGTGAAATATTTGATCCCAGAAGACACTCAGCCTTTTCAGCGAGAATCACTCGAAGCAATTGG
TATACCTTCGAGTTTACGAATTACAAGTAAGGTACATAGGCATGTTTGTGCAATTAAGATTATTGCTACAACTCATCCTC
ATCCTAATATTGATGAGGTTCAGTCTTGGGTTGTGAAGTTTCTTAGGAAGTCTTTTCTCAAATTGTCAGCAAATAGTCAG
AAAGTAGATTTGATATATATCAGTCGAACTGATAGTCTTCATGTGCGAAAACTTCTAAATGAAGATTATTTCTTTAAACT
TCTTAAGCCTATTGGTTTCCAAATTTATAGATTATCTAAGTTAACATTTTCCGAACAAGTTTCTTTGTTTTCTAACGCTA
AAATGATAGTTGGAGTTCATGGGGCGGGTCTAGCAAATTTAGTGTTTTCACCAAGTCAGACAGTGGTTTATGAGCTTTTT
TCAACGTGTTATCAACCATCAATGTATGAGAGGTTATCTGAACTTGTAGGACTCGACTACCGAAAGATTGTCTGCCAAGC
AAATGAAAACTATGGGAGTGAACAAAAAACTAGTTTTTACATAGCAGAAAATGATATATATGCTATTGTTAAATCTGCCC
AAAAAATTATAGGAAAGCAAAAATAA

Upstream 100 bases:

>100_bases
CATAGAGAAAAAAAGGTATGGTGGCAAGGTTCACCATCTCTCCATGAATGGGCAGAACGCTATACGTCAATAAAACTACC
CAATATATAGGCAATCATAG

Downstream 100 bases:

>100_bases
TCAAAATGTTTACGTTAATGCCTCGTTATATTGAGATAGAGACATCTCGCTACTGTAATCGTTCATGTTTATGGTGTCCT
AATTCCGTAATACGTGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis Protein- Like Protein; TPR Repeat-Containing Protein; Capsular Polysaccharide Biosynthesis Protein-Like; Capsular Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKIFFLDLIKVVDKSFHSFFKNALSMIYAPTKILDYKNCSDYIQTFSVNLDKNEYLVVSINGGRVFTDRLTNITFISRKY
LCPCVSWQYLGTYLSSNGLERKILSDHENFVLNRKILIDCFPTKINSTVISLLTGGAANNNYFHWLFDTLPRIYMVKVAI
DKLDDHVKYLIPEDTQPFQRESLEAIGIPSSLRITSKVHRHVCAIKIIATTHPHPNIDEVQSWVVKFLRKSFLKLSANSQ
KVDLIYISRTDSLHVRKLLNEDYFFKLLKPIGFQIYRLSKLTFSEQVSLFSNAKMIVGVHGAGLANLVFSPSQTVVYELF
STCYQPSMYERLSELVGLDYRKIVCQANENYGSEQKTSFYIAENDIYAIVKSAQKIIGKQK

Sequences:

>Translated_381_residues
MKIFFLDLIKVVDKSFHSFFKNALSMIYAPTKILDYKNCSDYIQTFSVNLDKNEYLVVSINGGRVFTDRLTNITFISRKY
LCPCVSWQYLGTYLSSNGLERKILSDHENFVLNRKILIDCFPTKINSTVISLLTGGAANNNYFHWLFDTLPRIYMVKVAI
DKLDDHVKYLIPEDTQPFQRESLEAIGIPSSLRITSKVHRHVCAIKIIATTHPHPNIDEVQSWVVKFLRKSFLKLSANSQ
KVDLIYISRTDSLHVRKLLNEDYFFKLLKPIGFQIYRLSKLTFSEQVSLFSNAKMIVGVHGAGLANLVFSPSQTVVYELF
STCYQPSMYERLSELVGLDYRKIVCQANENYGSEQKTSFYIAENDIYAIVKSAQKIIGKQK
>Mature_381_residues
MKIFFLDLIKVVDKSFHSFFKNALSMIYAPTKILDYKNCSDYIQTFSVNLDKNEYLVVSINGGRVFTDRLTNITFISRKY
LCPCVSWQYLGTYLSSNGLERKILSDHENFVLNRKILIDCFPTKINSTVISLLTGGAANNNYFHWLFDTLPRIYMVKVAI
DKLDDHVKYLIPEDTQPFQRESLEAIGIPSSLRITSKVHRHVCAIKIIATTHPHPNIDEVQSWVVKFLRKSFLKLSANSQ
KVDLIYISRTDSLHVRKLLNEDYFFKLLKPIGFQIYRLSKLTFSEQVSLFSNAKMIVGVHGAGLANLVFSPSQTVVYELF
STCYQPSMYERLSELVGLDYRKIVCQANENYGSEQKTSFYIAENDIYAIVKSAQKIIGKQK

Specific function: Unknown

COG id: COG4421

COG function: function code G; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19920574, Length=108, Percent_Identity=35.1851851851852, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43824; Mature: 43824

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFFLDLIKVVDKSFHSFFKNALSMIYAPTKILDYKNCSDYIQTFSVNLDKNEYLVVSI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHEEEEEECCCCEEEEEE
NGGRVFTDRLTNITFISRKYLCPCVSWQYLGTYLSSNGLERKILSDHENFVLNRKILIDC
CCCEEEEHHHCCEEEEHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEEE
FPTKINSTVISLLTGGAANNNYFHWLFDTLPRIYMVKVAIDKLDDHVKYLIPEDTQPFQR
CCCHHHHHHHHHHCCCCCCCCEEEEHHHHCCHHEEHHHHHHHHCCCCEEECCCCCCCHHH
ESLEAIGIPSSLRITSKVHRHVCAIKIIATTHPHPNIDEVQSWVVKFLRKSFLKLSANSQ
HCHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KVDLIYISRTDSLHVRKLLNEDYFFKLLKPIGFQIYRLSKLTFSEQVSLFSNAKMIVGVH
EEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCEEEEEEC
GAGLANLVFSPSQTVVYELFSTCYQPSMYERLSELVGLDYRKIVCQANENYGSEQKTSFY
CCCHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEE
IAENDIYAIVKSAQKIIGKQK
EECCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIFFLDLIKVVDKSFHSFFKNALSMIYAPTKILDYKNCSDYIQTFSVNLDKNEYLVVSI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHEEEEEECCCCEEEEEE
NGGRVFTDRLTNITFISRKYLCPCVSWQYLGTYLSSNGLERKILSDHENFVLNRKILIDC
CCCEEEEHHHCCEEEEHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEEE
FPTKINSTVISLLTGGAANNNYFHWLFDTLPRIYMVKVAIDKLDDHVKYLIPEDTQPFQR
CCCHHHHHHHHHHCCCCCCCCEEEEHHHHCCHHEEHHHHHHHHCCCCEEECCCCCCCHHH
ESLEAIGIPSSLRITSKVHRHVCAIKIIATTHPHPNIDEVQSWVVKFLRKSFLKLSANSQ
HCHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KVDLIYISRTDSLHVRKLLNEDYFFKLLKPIGFQIYRLSKLTFSEQVSLFSNAKMIVGVH
EEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCEEEEEEC
GAGLANLVFSPSQTVVYELFSTCYQPSMYERLSELVGLDYRKIVCQANENYGSEQKTSFY
CCCHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEE
IAENDIYAIVKSAQKIIGKQK
EECCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA