| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077754
Identifier: 170077754
GI number: 170077754
Start: 1169020
End: 1169460
Strand: Reverse
Name: 170077754
Synonym: SYNPCC7002_A1136
Alternate gene names: NA
Gene position: 1169460-1169020 (Counterclockwise)
Preceding gene: 170077755
Following gene: 170077753
Centisome position: 38.88
GC content: 35.37
Gene sequence:
>441_bases ATGTTTACGTTAATGCCTCGTTATATTGAGATAGAGACATCTCGCTACTGTAATCGTTCATGTTTATGGTGTCCTAATTC CGTAATACGTGATCGGCATCAACAGGAACTTATGGAGTGGTCTCTTTATGCTGATTTGATTGGACAGCTAACTGAAGTGG ATTATGACGGCTGGCTAGCATTTCATAATTACAATGAACCACTTGCTAATCCTCGCTTAAAACAAGAAATTTCTTTTGCT AAAGGTAGTTTACCCAGTGTTAAGTTAGCAATTTACACTAATGGAGACTTGTTTAATGAGAAAATCTATGAATACCTATG CTCAATTGAAGTTTCAGAAATTCGTATTACACGTTATCCTAATTCACATGATCTACAACAGCCAGAAAAGCATGATTTAA ATCAACTTATGGGAATGGCTAGAGAAAAAAGACTTTCTTAA
Upstream 100 bases:
>100_bases ATGGGAGTGAACAAAAAACTAGTTTTTACATAGCAGAAAATGATATATATGCTATTGTTAAATCTGCCCAAAAAATTATA GGAAAGCAAAAATAATCAAA
Downstream 100 bases:
>100_bases AAATCTTGATTGGAAATATGTCGCGGCTCGTCAAGGAGATACTCTTGAATGCTATTTTCCCGTAAAAATCAGGATTATTG CTCCAAATGTGAACAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; SAM Domain-Containing Protein; Fe-S Oxidoreductase; Radical SAM Superfamily
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MFTLMPRYIEIETSRYCNRSCLWCPNSVIRDRHQQELMEWSLYADLIGQLTEVDYDGWLAFHNYNEPLANPRLKQEISFA KGSLPSVKLAIYTNGDLFNEKIYEYLCSIEVSEIRITRYPNSHDLQQPEKHDLNQLMGMAREKRLS
Sequences:
>Translated_146_residues MFTLMPRYIEIETSRYCNRSCLWCPNSVIRDRHQQELMEWSLYADLIGQLTEVDYDGWLAFHNYNEPLANPRLKQEISFA KGSLPSVKLAIYTNGDLFNEKIYEYLCSIEVSEIRITRYPNSHDLQQPEKHDLNQLMGMAREKRLS >Mature_146_residues MFTLMPRYIEIETSRYCNRSCLWCPNSVIRDRHQQELMEWSLYADLIGQLTEVDYDGWLAFHNYNEPLANPRLKQEISFA KGSLPSVKLAIYTNGDLFNEKIYEYLCSIEVSEIRITRYPNSHDLQQPEKHDLNQLMGMAREKRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17297; Mature: 17297
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLMPRYIEIETSRYCNRSCLWCPNSVIRDRHQQELMEWSLYADLIGQLTEVDYDGWLA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FHNYNEPLANPRLKQEISFAKGSLPSVKLAIYTNGDLFNEKIYEYLCSIEVSEIRITRYP EECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHEEEEECC NSHDLQQPEKHDLNQLMGMAREKRLS CCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTLMPRYIEIETSRYCNRSCLWCPNSVIRDRHQQELMEWSLYADLIGQLTEVDYDGWLA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FHNYNEPLANPRLKQEISFAKGSLPSVKLAIYTNGDLFNEKIYEYLCSIEVSEIRITRYP EECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHEEEEECC NSHDLQQPEKHDLNQLMGMAREKRLS CCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA