Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077747

Identifier: 170077747

GI number: 170077747

Start: 1161043

End: 1162209

Strand: Direct

Name: 170077747

Synonym: SYNPCC7002_A1129

Alternate gene names: NA

Gene position: 1161043-1162209 (Clockwise)

Preceding gene: 170077745

Following gene: 170077748

Centisome position: 38.6

GC content: 53.13

Gene sequence:

>1167_bases
ATGGCACAACCGCAGCATAATTTTTACCTCAGCCTCGAACGACGTTGGGTCGCTCCCGCCTATGGGGGTGGTATTTTATT
TGTCATTGCCCTCTGTTTTTTTGGGGCCGCCACAAATACGATGGCGGGCTGGTTATATGTCCTCAGCGGTACGATCCTCG
CCATTTTATGTTTAGGGGCAATCCTGCCAGTGCGAGCCTTGAGGCAACTTGAAATTCGGCGATCGCCCACGGCCCCGGTT
AGCGTTGGGGAAGTTTTAAGCATTCATCTAACCCTGACCAATGACAGTAAAAACGCCAAAACCCTCATTGCTGTCACAGA
TCAAATTTCGTCTGGCTTGGGGGCACCCCGGCGGACAGTCCTAGAAACCCTCTCACCCCAGGAAAGTTTAGATTGGGTCT
ACGAGCTAGATGCCCAAAAACGTGGTGTATTTCAGTGGGAGGGAGTCGAGTTGCGCACCGCAAACCCCTTGGGCTTGTTT
TGGTGTCGGCGGCGGCGTTCAGTACCGGGCCGGGTTGTGGTTTATCCGCAAATTTTTCCCCTGAGTAGTTGCCCGATCAT
TGACCACATCGGCAGCGAAGACAGCACCAAATTTCAGAGTGAAAATCTCTATCAAAACGCCACCGAAGGGATGACGAAGG
CGATTCGGAACTACCGGATGGGCGACCCAATGCGGTTGATCCACTGGCGCAGCAGTGCCCGCTTTGGGGAATTTAAGGTA
CGGGAGCTAGAAATTACCACGGGCGGCGAAGAACTGATTATTTGCTTGGATCATCATTTTGCTTGGGAGGCCGATAGCTT
TGAACAGGCGGCCAGTGCAGCGGCTTCTCTCTATTTTTATGCCCGGCGATCGCAACTGAATGTGAAATTTTGGACAGCCC
AGAGTGGTCTGCTCAACAGCCGCGCGACGATCCTCGAAGCCCTGGCCCGGATTAATCCTGAGCCATTAGGAGAAAATACG
TCTCTATCCCGCCCGGAAGGTTCATTGTTATGGTTAACCCAAAACCCCCAAACGCTCCTGGAGCTAAACCCCGGCAACCG
CTGGCTCTTTTTCCAAGGAGCGCCTGAACAAACGGTGACCGGGGGCCATTGTCCGGGTCTCATCATTAATCCCATCGATC
CCCTACCCCAACAGTTACAACGGCAAAGCGATCGCCTTTTATCCTAG

Upstream 100 bases:

>100_bases
ATTGGGAACAATGGAAAGGGGCATTACTATTGATCCTAGGTAAGGCCGTCCCCTGGAGAGCGGCGATCGTAAACATCCTT
AATGGTTTTCTCTTCAACCT

Downstream 100 bases:

>100_bases
GGTAATCCCAAGCAAACCAGGGCAGCGTGAGCAATTCTCCACAATTACCGCAAAAAAATCCCCAAGCCCCCCTGTATAAT
GGCTTGCAACCCATCTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPV
SVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLF
WCRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV
RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENT
SLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS

Sequences:

>Translated_388_residues
MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPV
SVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLF
WCRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV
RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENT
SLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS
>Mature_387_residues
AQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPVS
VGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFW
CRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKVR
ELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENTS
LSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43347; Mature: 43216

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGA
CCCCCCCEEEEEECEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ILPVRALRQLEIRRSPTAPVSVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTV
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCHHHH
LETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFWCRRRRSVPGRVVVYPQIFP
HHHCCCCHHCCEEEEECCCCCCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEC
LSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV
CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE
RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNS
EEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCH
RATILEALARINPEPLGENTSLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCC
GGHCPGLIINPIDPLPQQLQRQSDRLLS
CCCCCCEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGA
CCCCCCEEEEEECEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ILPVRALRQLEIRRSPTAPVSVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTV
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCHHHH
LETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFWCRRRRSVPGRVVVYPQIFP
HHHCCCCHHCCEEEEECCCCCCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEC
LSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV
CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE
RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNS
EEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCH
RATILEALARINPEPLGENTSLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCC
GGHCPGLIINPIDPLPQQLQRQSDRLLS
CCCCCCEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA