| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077710
Identifier: 170077710
GI number: 170077710
Start: 1120702
End: 1121655
Strand: Reverse
Name: 170077710
Synonym: SYNPCC7002_A1090
Alternate gene names: NA
Gene position: 1121655-1120702 (Counterclockwise)
Preceding gene: 170077711
Following gene: 170077709
Centisome position: 37.29
GC content: 53.56
Gene sequence:
>954_bases ATGTCCAGAGGCAAACGCGTCCAAGCTCCCCCCCTTGAAATTAACCTCCTCCGGGAAGGTCTCAAAGAATCCACTCACAT CGCCGAAGCCGTGGTGTGTGACACCAAAGGCCGTGTCCTGTCCATGGCTGGGGATGCCGAAAGCTCTGCCTTTATCCGGT CAGCCCTTAAACCCTTCCAAGCCCTTGCTGTGATTGGTACCGGGGCCCTAGATCATTACAAACTTTCCGATAAAGATTTA GCCGTCATTTGCAGTTCCCACCAAGGCACCAAGGAACACGCCCGTCAGGTGTTTCGCATCCTCTGGCAGGCGGATCTAGA ATCTGACGTTTTGCAATGTCCGATTCCCCACGGCAAAGACAGCGCCCTCGAACACAATTGTTCCGGAAAACACGCAGGGA TGCTGTTGACCTGTAAGCATTGCAACTGGGGCCTCGGTAGCTATATGGAAAAGTCCCACCCCGTCCAGGCTCTGATCCTC AATAAAATTGCCGAATTACTCCAGATGCCCGCCCAGGAATTTATCGGGGCGCGGGATGATTGCGGTGTCCCCACCTATTT GATGCAGCTTAGCCAAATGGCCACTCTCTATGCCCACCTCGCGTCTGGCGATCGCCTGGATGTGGAGCGGGTGGTGCGGG CAATGACCTATCACCCCACCATGGTATCTGGGCGAGGCGGCTTCGACACAGAATTAATGCGCCTCTCCGAAGGAGAAATT GTTAGTAAATCGGGTGCAGAGGGGATTCAGTGCATCGGTCGCGTCGGTGAAGGCTTAGGCTTGGCGATTAAGGTCAAAGA CGGTGCGAAACGAGCTAAATATGCCGTCGCCCTCTATCTTTTGACCCGTTTGGGTTGGATCACTCCCGCAGTCTCTGATA CTTTGGCGGAACAATTTTTATCCCTCAGTCCCTATAAGCGTTTAGATGTGGTGGGTGAATTATCCCTGGTTTAG
Upstream 100 bases:
>100_bases GTCTGTGGCTGCTATAAACCCTTAAATCTTCACAATCATTCCCGCCACCCCCGTATTTTTCCCCTATCCTTTTACTGCTG AACTTTTACCCCCAATCGTT
Downstream 100 bases:
>100_bases GCGGAAGATACCTTTGCCGTTGCCCCCAGGAAACCCGATACAATAGCAAACAGTCTTTGGGCACGGCACCATGTGGGAAA ATTTCAGTCTGCAACTGTAT
Product: L-asparaginase II (thermolabile)
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRGKRVQAPPLEINLLREGLKESTHIAEAVVCDTKGRVLSMAGDAESSAFIRSALKPFQALAVIGTGALDHYKLSDKDL AVICSSHQGTKEHARQVFRILWQADLESDVLQCPIPHGKDSALEHNCSGKHAGMLLTCKHCNWGLGSYMEKSHPVQALIL NKIAELLQMPAQEFIGARDDCGVPTYLMQLSQMATLYAHLASGDRLDVERVVRAMTYHPTMVSGRGGFDTELMRLSEGEI VSKSGAEGIQCIGRVGEGLGLAIKVKDGAKRAKYAVALYLLTRLGWITPAVSDTLAEQFLSLSPYKRLDVVGELSLV
Sequences:
>Translated_317_residues MSRGKRVQAPPLEINLLREGLKESTHIAEAVVCDTKGRVLSMAGDAESSAFIRSALKPFQALAVIGTGALDHYKLSDKDL AVICSSHQGTKEHARQVFRILWQADLESDVLQCPIPHGKDSALEHNCSGKHAGMLLTCKHCNWGLGSYMEKSHPVQALIL NKIAELLQMPAQEFIGARDDCGVPTYLMQLSQMATLYAHLASGDRLDVERVVRAMTYHPTMVSGRGGFDTELMRLSEGEI VSKSGAEGIQCIGRVGEGLGLAIKVKDGAKRAKYAVALYLLTRLGWITPAVSDTLAEQFLSLSPYKRLDVVGELSLV >Mature_316_residues SRGKRVQAPPLEINLLREGLKESTHIAEAVVCDTKGRVLSMAGDAESSAFIRSALKPFQALAVIGTGALDHYKLSDKDLA VICSSHQGTKEHARQVFRILWQADLESDVLQCPIPHGKDSALEHNCSGKHAGMLLTCKHCNWGLGSYMEKSHPVQALILN KIAELLQMPAQEFIGARDDCGVPTYLMQLSQMATLYAHLASGDRLDVERVVRAMTYHPTMVSGRGGFDTELMRLSEGEIV SKSGAEGIQCIGRVGEGLGLAIKVKDGAKRAKYAVALYLLTRLGWITPAVSDTLAEQFLSLSPYKRLDVVGELSLV
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34468; Mature: 34337
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGKRVQAPPLEINLLREGLKESTHIAEAVVCDTKGRVLSMAGDAESSAFIRSALKPFQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHH ALAVIGTGALDHYKLSDKDLAVICSSHQGTKEHARQVFRILWQADLESDVLQCPIPHGKD HHHHHHCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCC SALEHNCSGKHAGMLLTCKHCNWGLGSYMEKSHPVQALILNKIAELLQMPAQEFIGARDD CHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCC CGVPTYLMQLSQMATLYAHLASGDRLDVERVVRAMTYHPTMVSGRGGFDTELMRLSEGEI CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCE VSKSGAEGIQCIGRVGEGLGLAIKVKDGAKRAKYAVALYLLTRLGWITPAVSDTLAEQFL ECCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SLSPYKRLDVVGELSLV CCCCCHHHHHHHHCCCC >Mature Secondary Structure SRGKRVQAPPLEINLLREGLKESTHIAEAVVCDTKGRVLSMAGDAESSAFIRSALKPFQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHH ALAVIGTGALDHYKLSDKDLAVICSSHQGTKEHARQVFRILWQADLESDVLQCPIPHGKD HHHHHHCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCC SALEHNCSGKHAGMLLTCKHCNWGLGSYMEKSHPVQALILNKIAELLQMPAQEFIGARDD CHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCC CGVPTYLMQLSQMATLYAHLASGDRLDVERVVRAMTYHPTMVSGRGGFDTELMRLSEGEI CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCE VSKSGAEGIQCIGRVGEGLGLAIKVKDGAKRAKYAVALYLLTRLGWITPAVSDTLAEQFL ECCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SLSPYKRLDVVGELSLV CCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA