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The map label for this gene is trkA [C]

Identifier: 170077706

GI number: 170077706

Start: 1115412

End: 1117145

Strand: Direct

Name: trkA [C]

Synonym: SYNPCC7002_A1086

Alternate gene names: 170077706

Gene position: 1115412-1117145 (Clockwise)

Preceding gene: 170077702

Following gene: 170077707

Centisome position: 37.08

GC content: 54.09

Gene sequence:

>1734_bases
ATGCAACCAAAAATTATTGTCTGTGGTTTAGGACGAACGGGATATAAGATTTTTCGTCTACTGCAAAATCAAGGGGCTGA
GGTGATCGGCATTAGCGATCGCCCCAGTCGCCAGCGGGCAGCAGGCATTATTGTGGGGGATCCCCGCCAGGGACAACTCC
TCGTGCGAGCGGGAATTCACACAGCCCAAACCCTCGTCCTTGCCAGTAATGATGATGCCCTCAATCTCGCGGTGCTGACC
CAAGCGCGGGTGCTGAATCCAAAAATTCGCATTGTTAATCGTATTTATAATCAAGCCCTGGGCGATCGCCTCGATCAAAC
TCTGCCGGATCATGTGACCATGAGTGTTTCGGCCCTGGCCGCCCCCATTTTTGCCTTTGCCGCCCTGGGCAATAAAGCCA
TCGGCCAACTGCGTCTCTACGAAAAAACCTGGCCCATTTACGAAGAAGTGATCACCACGGATCATCCCTGGTTGGGCCAA
CCTCTCAGTGGGCTTTGGGAAAACCCAGAGCGGATGTTTATCCACTACCTACCAGCCCAGGGGGAAATGGATTTGGTGTC
GGCGGTGGTGGCCGACCAAACCCTCCAGGTGGGGGATCATTTAATCTTAGGGACGCCGCCCCAGGTCAAAAGTCAACGCT
ATTCTCTCTGGCAAAAATTTCGGAAGGCGATCGCCAATCTGCGGCAATACCAACATCACGTGCGGCCGATGACCCTGGTG
ACGGTGGCGTTGTTGGTGACCATCTGCATTGCCACCTTTACCTATGTTTGTGTGAATTTTAATTTGTCCCTGGTGGATGC
CCTCTATTTTTCAGTGGGGATGATCACTGGGGCCGGGGGAAAAGAAGAAGTCGCGGAACTCGCCCCCGATTGGGTCAAGG
TTTTCACGGCGGTGATGATGGTGGTCGGCGCCGGAGTTGTGGGGATCTGCTATGCGTTGATCAATGATTTCATTTTGGGA
AGTCGAATTCGTCAGTTTTGGGATGCGACAAAAATTCCCCACCAAAACCATTACGTAATTTGTGGCTTGGGAGGGATGGG
TATGGCGATCGCCCGCCAACTGCACCACCAGGGCTATGACGTTGTTGTTCTTGAAACCGACCACAACAACCGCTTTTTAC
GCACCGCCAGAACCTTGGGGATTCCGGTCATTCTTGCCGATGCCAGTGTGACCAGCAGTTTACGGGATGCACGGATTGCC
AAAGCAACGGCCCTCATTGCCGCCACCAGCCAAGACATGACCAACGTCGAAATTGCCCTGAGTGCCAAGGCGATCGCCCC
CAAGGTCAATGTGATCGTCCGGATTCAGGATACCAATTTCGCCCAGTCGGCCCAGGAAGTCTTTTCCTTTGATCTGGTGC
TTTCCCCGACGGAGTTGGCGACCCATTCTTTTGCTGCCGCCGCCCTAGGGGGACGTATCCTTGGCAACGGCATGACCGAT
GATTTGTTGTGGATTGCCCTTGCGACTCTAATTACCCCAAACCATCCTTTCTGTGGACAGCGAGTCCAGGACGCAGCGAT
CGCCCAAAATTTTGTGCCCCTCTACCTCGAATCCCAGGGAGAAGCGATTCACGGTTGGCCCCTCCTGCAACGGCAACTGC
AGCCCCAGGATGTGCTCTACATCACCATCGCTGCCAATGGCCTCCAAAAACTGTGGCGCAAGGAACCTAGCAATTCAGAA
GTGGCCTTTAACCCCTTCCCGTCAGTCCAAGGAAGCGAAGCCTTTGTGCCCTAG

Upstream 100 bases:

>100_bases
TCTGTGTGGTTCATTACACTCGCCGGGAACGTTTGGGTTTAAAACAGGAAGGGTAATTGATCTGTTGAGATAAGTCCTGA
TCAACCCAGGCCCAGTTTCC

Downstream 100 bases:

>100_bases
CAATCAATAAAGTTACATCTCAATCCAGGCGATCGCCAAACCAAAAGCTCTAAAATCAGAAATGTTAAGTACATCATGAC
GCATAGCTTTGAATTTTTGG

Product: TrkA family potassium channel protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK2 [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MQPKIIVCGLGRTGYKIFRLLQNQGAEVIGISDRPSRQRAAGIIVGDPRQGQLLVRAGIHTAQTLVLASNDDALNLAVLT
QARVLNPKIRIVNRIYNQALGDRLDQTLPDHVTMSVSALAAPIFAFAALGNKAIGQLRLYEKTWPIYEEVITTDHPWLGQ
PLSGLWENPERMFIHYLPAQGEMDLVSAVVADQTLQVGDHLILGTPPQVKSQRYSLWQKFRKAIANLRQYQHHVRPMTLV
TVALLVTICIATFTYVCVNFNLSLVDALYFSVGMITGAGGKEEVAELAPDWVKVFTAVMMVVGAGVVGICYALINDFILG
SRIRQFWDATKIPHQNHYVICGLGGMGMAIARQLHHQGYDVVVLETDHNNRFLRTARTLGIPVILADASVTSSLRDARIA
KATALIAATSQDMTNVEIALSAKAIAPKVNVIVRIQDTNFAQSAQEVFSFDLVLSPTELATHSFAAAALGGRILGNGMTD
DLLWIALATLITPNHPFCGQRVQDAAIAQNFVPLYLESQGEAIHGWPLLQRQLQPQDVLYITIAANGLQKLWRKEPSNSE
VAFNPFPSVQGSEAFVP

Sequences:

>Translated_577_residues
MQPKIIVCGLGRTGYKIFRLLQNQGAEVIGISDRPSRQRAAGIIVGDPRQGQLLVRAGIHTAQTLVLASNDDALNLAVLT
QARVLNPKIRIVNRIYNQALGDRLDQTLPDHVTMSVSALAAPIFAFAALGNKAIGQLRLYEKTWPIYEEVITTDHPWLGQ
PLSGLWENPERMFIHYLPAQGEMDLVSAVVADQTLQVGDHLILGTPPQVKSQRYSLWQKFRKAIANLRQYQHHVRPMTLV
TVALLVTICIATFTYVCVNFNLSLVDALYFSVGMITGAGGKEEVAELAPDWVKVFTAVMMVVGAGVVGICYALINDFILG
SRIRQFWDATKIPHQNHYVICGLGGMGMAIARQLHHQGYDVVVLETDHNNRFLRTARTLGIPVILADASVTSSLRDARIA
KATALIAATSQDMTNVEIALSAKAIAPKVNVIVRIQDTNFAQSAQEVFSFDLVLSPTELATHSFAAAALGGRILGNGMTD
DLLWIALATLITPNHPFCGQRVQDAAIAQNFVPLYLESQGEAIHGWPLLQRQLQPQDVLYITIAANGLQKLWRKEPSNSE
VAFNPFPSVQGSEAFVP
>Mature_577_residues
MQPKIIVCGLGRTGYKIFRLLQNQGAEVIGISDRPSRQRAAGIIVGDPRQGQLLVRAGIHTAQTLVLASNDDALNLAVLT
QARVLNPKIRIVNRIYNQALGDRLDQTLPDHVTMSVSALAAPIFAFAALGNKAIGQLRLYEKTWPIYEEVITTDHPWLGQ
PLSGLWENPERMFIHYLPAQGEMDLVSAVVADQTLQVGDHLILGTPPQVKSQRYSLWQKFRKAIANLRQYQHHVRPMTLV
TVALLVTICIATFTYVCVNFNLSLVDALYFSVGMITGAGGKEEVAELAPDWVKVFTAVMMVVGAGVVGICYALINDFILG
SRIRQFWDATKIPHQNHYVICGLGGMGMAIARQLHHQGYDVVVLETDHNNRFLRTARTLGIPVILADASVTSSLRDARIA
KATALIAATSQDMTNVEIALSAKAIAPKVNVIVRIQDTNFAQSAQEVFSFDLVLSPTELATHSFAAAALGGRILGNGMTD
DLLWIALATLITPNHPFCGQRVQDAAIAQNFVPLYLESQGEAIHGWPLLQRQLQPQDVLYITIAANGLQKLWRKEPSNSE
VAFNPFPSVQGSEAFVP

Specific function: Probable potassium channel protein [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 63212; Mature: 63212

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKIIVCGLGRTGYKIFRLLQNQGAEVIGISDRPSRQRAAGIIVGDPRQGQLLVRAGIH
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHCEEEEECCCCCCEEEEECCC
TAQTLVLASNDDALNLAVLTQARVLNPKIRIVNRIYNQALGDRLDQTLPDHVTMSVSALA
EEEEEEEECCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
APIFAFAALGNKAIGQLRLYEKTWPIYEEVITTDHPWLGQPLSGLWENPERMFIHYLPAQ
HHHHHHHHHCCHHHHEEEEEHHCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCC
GEMDLVSAVVADQTLQVGDHLILGTPPQVKSQRYSLWQKFRKAIANLRQYQHHVRPMTLV
CCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TVALLVTICIATFTYVCVNFNLSLVDALYFSVGMITGAGGKEEVAELAPDWVKVFTAVMM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHCHHHHHHHHHHHH
VVGAGVVGICYALINDFILGSRIRQFWDATKIPHQNHYVICGLGGMGMAIARQLHHQGYD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE
VVVLETDHNNRFLRTARTLGIPVILADASVTSSLRDARIAKATALIAATSQDMTNVEIAL
EEEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEE
SAKAIAPKVNVIVRIQDTNFAQSAQEVFSFDLVLSPTELATHSFAAAALGGRILGNGMTD
ECHHCCCCEEEEEEEECCCHHHHHHHHHEEHEEECCHHHHHHHHHHHHHCCCCCCCCCCH
DLLWIALATLITPNHPFCGQRVQDAAIAQNFVPLYLESQGEAIHGWPLLQRQLQPQDVLY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEECCHHHHHCCCCCCEEE
ITIAANGLQKLWRKEPSNSEVAFNPFPSVQGSEAFVP
EEEECHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQPKIIVCGLGRTGYKIFRLLQNQGAEVIGISDRPSRQRAAGIIVGDPRQGQLLVRAGIH
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHCEEEEECCCCCCEEEEECCC
TAQTLVLASNDDALNLAVLTQARVLNPKIRIVNRIYNQALGDRLDQTLPDHVTMSVSALA
EEEEEEEECCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
APIFAFAALGNKAIGQLRLYEKTWPIYEEVITTDHPWLGQPLSGLWENPERMFIHYLPAQ
HHHHHHHHHCCHHHHEEEEEHHCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCC
GEMDLVSAVVADQTLQVGDHLILGTPPQVKSQRYSLWQKFRKAIANLRQYQHHVRPMTLV
CCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TVALLVTICIATFTYVCVNFNLSLVDALYFSVGMITGAGGKEEVAELAPDWVKVFTAVMM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHCHHHHHHHHHHHH
VVGAGVVGICYALINDFILGSRIRQFWDATKIPHQNHYVICGLGGMGMAIARQLHHQGYD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE
VVVLETDHNNRFLRTARTLGIPVILADASVTSSLRDARIAKATALIAATSQDMTNVEIAL
EEEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEE
SAKAIAPKVNVIVRIQDTNFAQSAQEVFSFDLVLSPTELATHSFAAAALGGRILGNGMTD
ECHHCCCCEEEEEEEECCCHHHHHHHHHEEHEEECCHHHHHHHHHHHHHCCCCCCCCCCH
DLLWIALATLITPNHPFCGQRVQDAAIAQNFVPLYLESQGEAIHGWPLLQRQLQPQDVLY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEECCHHHHHCCCCCCEEE
ITIAANGLQKLWRKEPSNSEVAFNPFPSVQGSEAFVP
EEEECHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]