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The map label for this gene is rpmC

Identifier: 170077677

GI number: 170077677

Start: 1085259

End: 1085465

Strand: Reverse

Name: rpmC

Synonym: SYNPCC7002_A1057

Alternate gene names: 170077677

Gene position: 1085465-1085259 (Counterclockwise)

Preceding gene: 170077678

Following gene: 170077676

Centisome position: 36.09

GC content: 49.28

Gene sequence:

>207_bases
ATGCCTTTACCCAAGATTGAAGATGCTCGCAAACTCAATGACCAAGAGCTTGCTGACGAAATCGTTGCCGTCAAGAAACA
ATTGTTTGACCTCCGTCTCCAACAAGGTACTGGTCGCCTGGAGAAAACCCATGAGATCAAGCATGCTCGTCACCGTCTCG
CCCTGTTGATGACAGTCGAGCGCCAAAGACAACTCCAAGCTCAGTAA

Upstream 100 bases:

>100_bases
TGTCGCTGAGCCAATCGCCCGTGAAGCCATGCGCCTTGCGGCCCAAAAGCTGCCGATTAAAACCAAGTTCATCACCCGCA
ACGAGGAGTATATCTAAATC

Downstream 100 bases:

>100_bases
AAGTAGGAGACAGAATCTCGTATGGCTACGAAAGAAAGAGTGGGAATGGTCGTCAGCGACAAAATGGATAAAACCGTGAT
TGTGGCTGTGGAAAACCGCT

Product: ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MPLPKIEDARKLNDQELADEIVAVKKQLFDLRLQQGTGRLEKTHEIKHARHRLALLMTVERQRQLQAQ

Sequences:

>Translated_68_residues
MPLPKIEDARKLNDQELADEIVAVKKQLFDLRLQQGTGRLEKTHEIKHARHRLALLMTVERQRQLQAQ
>Mature_67_residues
PLPKIEDARKLNDQELADEIVAVKKQLFDLRLQQGTGRLEKTHEIKHARHRLALLMTVERQRQLQAQ

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_SYNP2 (B1XJT1)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734315.1
- ProteinModelPortal:   B1XJT1
- SMR:   B1XJT1
- GeneID:   6055327
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1057
- HOGENOM:   HBG730819
- OMA:   NTHRFKE
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7995; Mature: 7864

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPKIEDARKLNDQELADEIVAVKKQLFDLRLQQGTGRLEKTHEIKHARHRLALLMTVE
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RQRQLQAQ
HHHHHCCC
>Mature Secondary Structure 
PLPKIEDARKLNDQELADEIVAVKKQLFDLRLQQGTGRLEKTHEIKHARHRLALLMTVE
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RQRQLQAQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA