| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is tkt [H]
Identifier: 170077643
GI number: 170077643
Start: 1060473
End: 1062479
Strand: Reverse
Name: tkt [H]
Synonym: SYNPCC7002_A1022
Alternate gene names: 170077643
Gene position: 1062479-1060473 (Counterclockwise)
Preceding gene: 170077644
Following gene: 170077641
Centisome position: 35.32
GC content: 52.91
Gene sequence:
>2007_bases ATGACCGTTGCAACCCAATCTATAGATCAGCTTTGTATTAATGCAATTCGCTTTTTAGCAATTGATGGCGTCGAGAAGGC AAAATCTGGTCACCCCGGTTTACCGATGGGCGCCGCTCCCATGGCCTACACCCTCTGGGACAAATTTATGCGGTTCAACC CCAAAAATCCGAAATGGGTTAACCGCGATCGCTTTGTTTTGTCAGCGGGTCACGGTTCGATGCTGCAGTATGCCTTGATG TACTTGGCTGGCTATGACAGTGTTTCCCTCGAAGACATCAAGCAATTTCGTCAATGGAAATCGAAGACCCCTGGTCACCC TGAAAACTTCGAGACCCCTGGTGTAGAAGTTACGACTGGCCCCCTCGGCCAAGGGATCGCCAATGCCGTCGGCCTCGCCC TCGCGGAAGCACACCTCGCAGCCCGCTACAACAAGCCCGATGCCAAAATTTTTGACCATTACACCTATGTGATTATGGGT GATGGTTGCAACATGGAAGGAATCTCCGGGGAAGCGGCATCCATTGCGGGTCACTGGGGTCTGGGCAAATTAATTGCCCT CTACGACGATAACCATATTTCCATCGACGGCTCCACGGACATTGCTTTCACTGAAGATGTGTGTAAGCGCTATGAGTCCT ACGGTTGGCACGTGCTCCATGTCGAAGATGGCAACAATGACATTGAGGCGATCGCCAAAGCCATTGAAGCGGCTAAGGCA GTGACTGACAAGCCCTCTTTGATCAAAATCACAACGACCATTGGTTACGGTTCCCCCAACAAAGCAGATACCGCTGGGGT ACACGGGGCAGCCCTTGGTGCCGACGAAATTGAACTGACCCGTAAATCCCTCGAATGGAACTATGGGCCTTTTGAAGTGC CTGAAGATGCCCTCAACCATTTCCGGAAAGCCGTTGAACGGGGTGCCAGCGCCGAAGCAGAGTGGGACCAAGTATGGGCC ACCTACAAAACAAAATATGCCGAGGAGGCTGCAGAATTAGAGCGGATTCTTTCTGGGAAGCCCCCCGCAAACTGGGCTGA CGCTTTACCCACCGCAACGCCCGCCGATAAAGGTCTTGCGACCCGTAAGCACTCCGAAGTAACCCTGAATGCGATCGCCC CGGTATTACCAGAATTGATCGGTGGTTCTGCGGACTTGACTCACTCCAACCTGACAGAAATCCACGTTTCTGGCGATTTC CAAAAAGGTGCCTACGAAAACCGCAACGTCCACTTCGGCGTCCGGGAACATGCCATGGGCGCGATCTGTAATGGCATCGC CCTCCACGGTACAGGTTTAATCCCTTACGGAGCCACTTTCCTTGTGTTCTCCGACTACATGCGAAATTCCATCCGTTTAT CGGCCCTGTCCGAAGCACGGGTCATTTGGGTAATGACCCACGACTCCATTGCCCTTGGAGAAGACGGCCCCACCCACCAA CCGATCGAGCATGTTGCTTCTCTGCGGGCGATGCCGAACCTCTATGTTTATCGTCCGGCAGATACCAACGAAACCTCCGG TGCCTATAAAGTTGCTGTGGAAAGTGCGACAACGCCGACCCTCTTAGCCCTCACCCGTCAAGGTCTCCCCAACCTCGAAG GCAGTTCCATCGAAAATGCGGAAAAAGGTGGCTACATCCTTTCCGATAGCGAAGGCACCCCTGATCTGATTTTGATTGGT ACAGGGAGTGAAGTGCAGCTTTGTGTCGAAGCAGCAAAAGCACTCCGGGCAAACGGCAAAAATGTCCGTGTTGTTTCCAT GCCCTGTGTGGAACGCTTTGAAGAGCAAGATGCCGCTTACCAAGAGTCCGTACTGCCGAAAGCTGTAACCAAACGGGTTG CCGTGGAGGCTGGTGCCACCATGAGCTGGTACAAGTACGTTGGCTTTGAAGGCGCTGTCATCGGTATTGACACCTACGGT GCTTCCGCTCCTGGTGGTGTGGTCATGGAGAAATTTGGTTTCACCGTGGACAACGTTGTTAAAACCGCTGAGACAGTACT AGGTTAA
Upstream 100 bases:
>100_bases GATGGGGGGGATTTTGAGGAGGGCAATTTGCGCTTCTTGATGGTCTAACAACTCCCTATAGTTTTTCTTTATTTGTCGTT TACTGTCAGAAATTTTCACT
Downstream 100 bases:
>100_bases AACCCTGGGTCTGGTCATAGACTGATTCTTTTCAGTAAAACGTTTTGGAGGTAGGGGATAAACCTACCTCTTTTTTGTTT GTGACAATATTGCCTAGCCT
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALM YLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMG DGCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWA TYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDF QKGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIG TGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYG ASAPGGVVMEKFGFTVDNVVKTAETVLG
Sequences:
>Translated_668_residues MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALM YLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMG DGCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWA TYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDF QKGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIG TGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYG ASAPGGVVMEKFGFTVDNVVKTAETVLG >Mature_667_residues TVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALMY LAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGD GCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKAV TDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWAT YKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQ KGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQP IEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIGT GSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGA SAPGGVVMEKFGFTVDNVVKTAETVLG
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=578, Percent_Identity=26.1245674740484, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI4507521, Length=578, Percent_Identity=26.1245674740484, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI133778974, Length=576, Percent_Identity=26.5625, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI225637459, Length=588, Percent_Identity=22.6190476190476, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI225637463, Length=512, Percent_Identity=23.6328125, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI225637461, Length=512, Percent_Identity=23.6328125, Blast_Score=107, Evalue=5e-23, Organism=Escherichia coli, GI48994911, Length=662, Percent_Identity=54.0785498489426, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=663, Percent_Identity=52.790346907994, Blast_Score=677, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=594, Percent_Identity=26.5993265993266, Blast_Score=144, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6325331, Length=667, Percent_Identity=54.7226386806597, Blast_Score=701, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319593, Length=670, Percent_Identity=51.1940298507463, Blast_Score=660, Evalue=0.0, Organism=Drosophila melanogaster, GI45551847, Length=676, Percent_Identity=26.0355029585799, Blast_Score=169, Evalue=9e-42, Organism=Drosophila melanogaster, GI45550715, Length=676, Percent_Identity=26.0355029585799, Blast_Score=169, Evalue=9e-42, Organism=Drosophila melanogaster, GI24645119, Length=648, Percent_Identity=25.9259259259259, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI24666278, Length=678, Percent_Identity=26.2536873156342, Blast_Score=152, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 71994; Mature: 71863
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWV CCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE NRDRFVLSAGHGSMLQYALMYLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTG CCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC PLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGDGCNMEGISGEAASIAGHWG CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHEECCCC LGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA CCEEEEEEECCEEEECCCCCEEECHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNH HCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FRKAVERGASAEAEWDQVWATYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC TRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQKGAYENRNVHFGVREHAMG CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHH AICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ HHHCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEECCCCCCCH PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENA HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCC EKGGYILSDSEGTPDLILIGTGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAY CCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH QESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGASAPGGVVMEKFGFTVDNVV HHHHCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHH KTAETVLG HHHHHHCC >Mature Secondary Structure TVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWV CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE NRDRFVLSAGHGSMLQYALMYLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTG CCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC PLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGDGCNMEGISGEAASIAGHWG CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHEECCCC LGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA CCEEEEEEECCEEEECCCCCEEECHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNH HCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FRKAVERGASAEAEWDQVWATYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC TRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQKGAYENRNVHFGVREHAMG CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHH AICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ HHHCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEECCCCCCCH PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENA HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCC EKGGYILSDSEGTPDLILIGTGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAY CCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH QESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGASAPGGVVMEKFGFTVDNVV HHHHCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHH KTAETVLG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]