Click here to switch to the map view.

The map label for this gene is 170077638

Identifier: 170077638

GI number: 170077638

Start: 1050247

End: 1052094

Strand: Reverse

Name: 170077638

Synonym: SYNPCC7002_A1017

Alternate gene names: NA

Gene position: 1052094-1050247 (Counterclockwise)

Preceding gene: 170077639

Following gene: 170077637

Centisome position: 34.98

GC content: 33.93

Gene sequence:

>1848_bases
TTGATTTGTTGGCAAAAAACAGAAGCTGATATTAGAAGTGATGTATCTGGATGGGAAATTTATAGAGGGTTTAAACTTGA
TATTTTTGTTTCTTCTCAAGGAAATGTATTCTTAGAAGTAGACGAGCATTATAAATTGTTTAGTGCTTGGACACTAACTC
AATGGCTAGAATGGTATCCTGATTTTTCAGCAAAAATACTAAGAAACACATATGACGGACGTACTTGGAAACTTCAGAAA
ATAACAAATGAAGATCCAAATAATATAGATTCCGGTACAGGTCAAACACTTGCCACATACCACAAAAATCATCAAAAGCC
AGCTACAGATCAAGAAATCAATTCATCAAAAGTAATTTATGTAAAACCCTACAACAGCAAAAAAGAAGAGTCTTATCCAC
ATTTGTCATCAAGAGTTAAACCATGTTTATTCCTCGATACCTTGTCTGAATTAGCATCACAAGGAGATCGAAAAGTCAAA
GAGGTTTTTAATCTCATTAAACCATCTATTGAAGATAGATTCTCTAGAGCAACTGAAATTGCTAAACAATTAGCCGTCGA
AATTTATAATATAGATGAAGAAATCTCTGATGATATTAAAGTCGTTCAAGTTCAAGCTCAACAATCCTCTCAAGATAAAT
CAATTTTACTTGCACATTCCTCAAAGAGAATTGATAAGGTTTTCAAAAGCCTCGACCAAGGATGCTTTCGAGTAGGAGAA
ATCAAATTTGGATGTATTAATTTATTAGATAAAAACCAAGATGGCTGGTCAAAGTTTATTTTGCAAAAGCTTCAAAAACT
GGCCACAATACACAACATCAATATTGATGCCAATTTAGTTAAAGCAGCAGTTGACATTCCTGAAAAAGATTTTGAAATTG
ATCAATTTTGGGAATCATGGGTGGAACAGGATATTAAAACAATCCTTGTCATTTCTGAATGGTTAGATAATAAATACAAA
ACTAAACTAACTAGAGATGCTTTAGAACATGGAATTACCCTTCAGTTTATGCTGCCATTGAAGGAAAATGTTCGACGTAT
AGAAAGTAATAAAGGGGTTGAATCTAAAATTACTTGTTTTACCTCAGATCAATACCGTGCCAATAATATACTTCTTGGAT
TACTTGCAAAAGCCGGATGGCAAGCTGTTGGCTTACCTCTGTTAAATAATGAATATGCTGCTGATTTAGTAATCGGTTTT
GATGCAGGTAGAAATGAAACATTATCCTATGGAACTAGCTCATTTGCTGTATTGGCAGATGGTCAAATTTTAGGTTGGGA
ACTTCCAGAAGCACAAAAAGGAGAGATTTTAGATCCTGATCATGTTAGGCGAACAGTCAGAAGAATCATTAGTCAATTTC
AAAAAATGAATGGTAAACAATCTCCCAAACGTATATTGCTGATGCGAGATGGATTGATTCAACAACAAGAATTTTCATTG
ATTACGGAAGCATTAGAAGAAGGAGAGATTAAATATGACTTGATTAGTGTAAGAAAAAGTGGAGCAGGAAGAATTGGTAG
ACGAAATTCTGATGGAACTTATGTAGATGCTCCAAAAGGAACAGTTATTTTTTCTGGTAATGATAAATTTAAGATTGTCA
CATCTGAGGCAAAAGCTGGTGGTAGTGCTAGACCTTTATTTGTTGTTCGTGAACAAGGTGATACTCCAATTGAAATTATC
GCAGAACAATTTTATCGATTGACACAGCTACATCCTGTTAGCGGTTCTTTTACAAGCCGTTTACCGATGCCATTGAATTA
TGCAGATAAATTAGCCAAAAAAATTCAGTCTTTAGGATCTGTGGGGATTTTACAAAATCTTGATCGCAAGAAACTATTTT
TTGTTTAG

Upstream 100 bases:

>100_bases
TGATCGTATTACACTAGAAAAGCTTCAGAGAAAAATATTAAAAGATCGTCTATATAAACAATGTAAATATTATATTGAAA
ACAACTCAAGTCAAGGTGGT

Downstream 100 bases:

>100_bases
AAAGAGGAATGTTTGTATATGTCTTTAGCTTTAACGATTTACTATTCAGAACATTTCCCTGATACTGTCGGCAAAACTCA
ACGGAAATTTGAAGAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Stem Cell Self-Renewal Protein Piwi Domain Protein

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MICWQKTEADIRSDVSGWEIYRGFKLDIFVSSQGNVFLEVDEHYKLFSAWTLTQWLEWYPDFSAKILRNTYDGRTWKLQK
ITNEDPNNIDSGTGQTLATYHKNHQKPATDQEINSSKVIYVKPYNSKKEESYPHLSSRVKPCLFLDTLSELASQGDRKVK
EVFNLIKPSIEDRFSRATEIAKQLAVEIYNIDEEISDDIKVVQVQAQQSSQDKSILLAHSSKRIDKVFKSLDQGCFRVGE
IKFGCINLLDKNQDGWSKFILQKLQKLATIHNINIDANLVKAAVDIPEKDFEIDQFWESWVEQDIKTILVISEWLDNKYK
TKLTRDALEHGITLQFMLPLKENVRRIESNKGVESKITCFTSDQYRANNILLGLLAKAGWQAVGLPLLNNEYAADLVIGF
DAGRNETLSYGTSSFAVLADGQILGWELPEAQKGEILDPDHVRRTVRRIISQFQKMNGKQSPKRILLMRDGLIQQQEFSL
ITEALEEGEIKYDLISVRKSGAGRIGRRNSDGTYVDAPKGTVIFSGNDKFKIVTSEAKAGGSARPLFVVREQGDTPIEII
AEQFYRLTQLHPVSGSFTSRLPMPLNYADKLAKKIQSLGSVGILQNLDRKKLFFV

Sequences:

>Translated_615_residues
MICWQKTEADIRSDVSGWEIYRGFKLDIFVSSQGNVFLEVDEHYKLFSAWTLTQWLEWYPDFSAKILRNTYDGRTWKLQK
ITNEDPNNIDSGTGQTLATYHKNHQKPATDQEINSSKVIYVKPYNSKKEESYPHLSSRVKPCLFLDTLSELASQGDRKVK
EVFNLIKPSIEDRFSRATEIAKQLAVEIYNIDEEISDDIKVVQVQAQQSSQDKSILLAHSSKRIDKVFKSLDQGCFRVGE
IKFGCINLLDKNQDGWSKFILQKLQKLATIHNINIDANLVKAAVDIPEKDFEIDQFWESWVEQDIKTILVISEWLDNKYK
TKLTRDALEHGITLQFMLPLKENVRRIESNKGVESKITCFTSDQYRANNILLGLLAKAGWQAVGLPLLNNEYAADLVIGF
DAGRNETLSYGTSSFAVLADGQILGWELPEAQKGEILDPDHVRRTVRRIISQFQKMNGKQSPKRILLMRDGLIQQQEFSL
ITEALEEGEIKYDLISVRKSGAGRIGRRNSDGTYVDAPKGTVIFSGNDKFKIVTSEAKAGGSARPLFVVREQGDTPIEII
AEQFYRLTQLHPVSGSFTSRLPMPLNYADKLAKKIQSLGSVGILQNLDRKKLFFV
>Mature_615_residues
MICWQKTEADIRSDVSGWEIYRGFKLDIFVSSQGNVFLEVDEHYKLFSAWTLTQWLEWYPDFSAKILRNTYDGRTWKLQK
ITNEDPNNIDSGTGQTLATYHKNHQKPATDQEINSSKVIYVKPYNSKKEESYPHLSSRVKPCLFLDTLSELASQGDRKVK
EVFNLIKPSIEDRFSRATEIAKQLAVEIYNIDEEISDDIKVVQVQAQQSSQDKSILLAHSSKRIDKVFKSLDQGCFRVGE
IKFGCINLLDKNQDGWSKFILQKLQKLATIHNINIDANLVKAAVDIPEKDFEIDQFWESWVEQDIKTILVISEWLDNKYK
TKLTRDALEHGITLQFMLPLKENVRRIESNKGVESKITCFTSDQYRANNILLGLLAKAGWQAVGLPLLNNEYAADLVIGF
DAGRNETLSYGTSSFAVLADGQILGWELPEAQKGEILDPDHVRRTVRRIISQFQKMNGKQSPKRILLMRDGLIQQQEFSL
ITEALEEGEIKYDLISVRKSGAGRIGRRNSDGTYVDAPKGTVIFSGNDKFKIVTSEAKAGGSARPLFVVREQGDTPIEII
AEQFYRLTQLHPVSGSFTSRLPMPLNYADKLAKKIQSLGSVGILQNLDRKKLFFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69947; Mature: 69947

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50822 PIWI ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICWQKTEADIRSDVSGWEIYRGFKLDIFVSSQGNVFLEVDEHYKLFSAWTLTQWLEWYP
CCCCCCCCHHHHCCCCCCEEEECEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCC
DFSAKILRNTYDGRTWKLQKITNEDPNNIDSGTGQTLATYHKNHQKPATDQEINSSKVIY
CHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEE
VKPYNSKKEESYPHLSSRVKPCLFLDTLSELASQGDRKVKEVFNLIKPSIEDRFSRATEI
EECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
AKQLAVEIYNIDEEISDDIKVVQVQAQQSSQDKSILLAHSSKRIDKVFKSLDQGCFRVGE
HHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC
IKFGCINLLDKNQDGWSKFILQKLQKLATIHNINIDANLVKAAVDIPEKDFEIDQFWESW
EEEEEEEHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
VEQDIKTILVISEWLDNKYKTKLTRDALEHGITLQFMLPLKENVRRIESNKGVESKITCF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEE
TSDQYRANNILLGLLAKAGWQAVGLPLLNNEYAADLVIGFDAGRNETLSYGTSSFAVLAD
ECCCCCCCHHHHHHHHHCCCCEECCEEECCCCEEEEEEEECCCCCCEEECCCCCEEEEEC
GQILGWELPEAQKGEILDPDHVRRTVRRIISQFQKMNGKQSPKRILLMRDGLIQQQEFSL
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
ITEALEEGEIKYDLISVRKSGAGRIGRRNSDGTYVDAPKGTVIFSGNDKFKIVTSEAKAG
HHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCCCC
GSARPLFVVREQGDTPIEIIAEQFYRLTQLHPVSGSFTSRLPMPLNYADKLAKKIQSLGS
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
VGILQNLDRKKLFFV
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MICWQKTEADIRSDVSGWEIYRGFKLDIFVSSQGNVFLEVDEHYKLFSAWTLTQWLEWYP
CCCCCCCCHHHHCCCCCCEEEECEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCC
DFSAKILRNTYDGRTWKLQKITNEDPNNIDSGTGQTLATYHKNHQKPATDQEINSSKVIY
CHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEE
VKPYNSKKEESYPHLSSRVKPCLFLDTLSELASQGDRKVKEVFNLIKPSIEDRFSRATEI
EECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
AKQLAVEIYNIDEEISDDIKVVQVQAQQSSQDKSILLAHSSKRIDKVFKSLDQGCFRVGE
HHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC
IKFGCINLLDKNQDGWSKFILQKLQKLATIHNINIDANLVKAAVDIPEKDFEIDQFWESW
EEEEEEEHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
VEQDIKTILVISEWLDNKYKTKLTRDALEHGITLQFMLPLKENVRRIESNKGVESKITCF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEE
TSDQYRANNILLGLLAKAGWQAVGLPLLNNEYAADLVIGFDAGRNETLSYGTSSFAVLAD
ECCCCCCCHHHHHHHHHCCCCEECCEEECCCCEEEEEEEECCCCCCEEECCCCCEEEEEC
GQILGWELPEAQKGEILDPDHVRRTVRRIISQFQKMNGKQSPKRILLMRDGLIQQQEFSL
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
ITEALEEGEIKYDLISVRKSGAGRIGRRNSDGTYVDAPKGTVIFSGNDKFKIVTSEAKAG
HHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCCCC
GSARPLFVVREQGDTPIEIIAEQFYRLTQLHPVSGSFTSRLPMPLNYADKLAKKIQSLGS
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
VGILQNLDRKKLFFV
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA