| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077618
Identifier: 170077618
GI number: 170077618
Start: 1025817
End: 1026182
Strand: Direct
Name: 170077618
Synonym: SYNPCC7002_A0997
Alternate gene names: NA
Gene position: 1025817-1026182 (Clockwise)
Preceding gene: 170077617
Following gene: 170077619
Centisome position: 34.1
GC content: 50.55
Gene sequence:
>366_bases ATGGCCTCTTCATCCGCTGCCGACGAAGTCAATTTAGAACAATTAGCTGAGATGGTCAGCTATGACTTAGCAACATTGCA AGACCTCGTTGAAACTTTTTTAGGAGATACGCCCCTACTGATTGCGGCGATGCAGACGGGTTACGAACAACACAATCAGG CGGAGCTTGTGCGCAATGCCCACACCCTCAAATCCAGTAGTCGGCTATTTCAAATGGAGCAATTTGCTCGCCAATGCCAG GCCCTAGAGGGGGCAGCCCATGCCGAAGATTGGCCTCTCGTGGCAACTCTCTTACAGCAGCTAGGGCAAGACTATCAGGC GATCGCCGCTGCTCTAACTATTAAACTGACCCAATTAATGGCTTAG
Upstream 100 bases:
>100_bases GTAAACCGATTCAAGTAAAAAAGCTCCTCCATGCCCTAAAGGTCGCCTACCATTACCATCAGTCCCTCTCCACTACCCAG TCTTCTTCTGATTAAAGTCT
Downstream 100 bases:
>100_bases GCGGAGTCCTAGCACTAATTCAAAATAGCCTCGCAAGATAATCCAGCAGAATCGCTACAATTTTTGTTAGATCATCGTTT TGTGCAATGGAGAACTATGG
Product: signal transduction histidine-kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MASSSAADEVNLEQLAEMVSYDLATLQDLVETFLGDTPLLIAAMQTGYEQHNQAELVRNAHTLKSSSRLFQMEQFARQCQ ALEGAAHAEDWPLVATLLQQLGQDYQAIAAALTIKLTQLMA
Sequences:
>Translated_121_residues MASSSAADEVNLEQLAEMVSYDLATLQDLVETFLGDTPLLIAAMQTGYEQHNQAELVRNAHTLKSSSRLFQMEQFARQCQ ALEGAAHAEDWPLVATLLQQLGQDYQAIAAALTIKLTQLMA >Mature_120_residues ASSSAADEVNLEQLAEMVSYDLATLQDLVETFLGDTPLLIAAMQTGYEQHNQAELVRNAHTLKSSSRLFQMEQFARQCQA LEGAAHAEDWPLVATLLQQLGQDYQAIAAALTIKLTQLMA
Specific function: Unknown
COG id: COG2198
COG function: function code T; FOG: HPt domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13267; Mature: 13136
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSAADEVNLEQLAEMVSYDLATLQDLVETFLGDTPLLIAAMQTGYEQHNQAELVRNA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH HTLKSSSRLFQMEQFARQCQALEGAAHAEDWPLVATLLQQLGQDYQAIAAALTIKLTQLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH A C >Mature Secondary Structure ASSSAADEVNLEQLAEMVSYDLATLQDLVETFLGDTPLLIAAMQTGYEQHNQAELVRNA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH HTLKSSSRLFQMEQFARQCQALEGAAHAEDWPLVATLLQQLGQDYQAIAAALTIKLTQLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA