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The map label for this gene is recJ [H]

Identifier: 170077601

GI number: 170077601

Start: 1008671

End: 1010671

Strand: Direct

Name: recJ [H]

Synonym: SYNPCC7002_A0980

Alternate gene names: 170077601

Gene position: 1008671-1010671 (Clockwise)

Preceding gene: 170077600

Following gene: 170077603

Centisome position: 33.53

GC content: 52.17

Gene sequence:

>2001_bases
ATGAATTTTCGCCTCCCCCAACAGCGCTGGCACATTGCCGATCGCCAACCGGATATCACCCAATCATTGGTTGAGGCGAT
GGGCCTTAATCCGCTTGTGGCCCAGGTTTTAGTGAATCGCAATATTCGCACGCCAGAGCAGGCGAAGATCTACATCCAGC
CGGAATCCCAGCGATTACCTGCGCCCTTGGTGGAATTTGAGGATCTGGCCCTCAGTGTGGAACTTCTCCAGGAGGCGATC
GCCGAAGAAACTCTCATTGCCATTTGTGGCGATTATGATGCCGATGGGATGACCAGTACCGCGTTGTTGTTGCGGGCCTT
GGGCCATGTGGGAACCAAGGTAACCTACGCGATCCCCAGTCGCATGAAAGATGGCTACGGGATCAATGAGCGCATCGTCA
CCGAGCTCGCCGAGGAAGGGGTGGGCTTAATTCTCACGGTAGACAACGGCATTTCCGCCTACGAGCCGATCAATTTGGCG
CGGGATCTGGGCCTGGATGTGATCATCACTGACCACCATGACTTGCCGGATCAATTGCCGCCCGCCAATGCGATTCTGAA
TCCAAAGTTATTGCCGACCATGTCTCCTTATGCTGGTTTAGCCGGGGTTGGGGTAGCTTATGTGCTGGCGGTGTCCCTCG
CCCAGGCGGTAGACAAGCTAGAAGGGCTCACCAGCCAAATTTTAGAATTATTTACCCTGGGGACCATCGCTGATCTGGCG
CCCTTGACCGGGGTGAATCGTCGCTGGTTGAAGCGTGGCCTCAAGCTTTTACCCCAGTCGGAGTTGGCAGGGGTGCAGGC
CCTCATGCAAATTGCTGGGGTCGATGACCAAAAGAAACAACTCAAGCCCGATGATATTGGCTTTCGCCTTGGCCCCCGCA
TTAACGCCGTTGGTCGCATTGATGATCCCCAAAAAGTAATTGAATTGCTAACTACCGACGAACCGGGTTTGGCCCTAGAG
CGGGCGATGCAATGTGAGCAGATCAATAAGCAGCGCCAGGAAATGTGCACCCAGATCGAAGCGGAGGCGATCGCCCTAGT
AGAAGAAACCCCCATCGATTACCAAGGACAGCGGGTGTTGGTGGTTTGCAAAGAAGAATGGCACCATGGCGTAATTGGCA
TTGTCGCTTCCCGGTTGGTCGAACGCTATGGTGTGCCCGTCTTTATCTGTACTGCTGAGGAAGATGGCAAAATTCGCGGT
TCAGCCCGGGGCATCGAAGAATTTAATGTGTTTGAGGCGCTGAACTATTGCCAAGATCTCCTGGGTAAATTTGGGGGCCA
CAAAGCCGCTGGGGGATTTTCCCTTGCCAGAGATAACCTAGCTGCGTTTACCGAAAAACTTAGTGAATTTGCCCACCAAT
TGCTCAAACCAGAACACCTAAAACCCTTGGTGAAAATTGACGGGGCGGTAAATTTCACGGATTTAACCCCAGAGTTTTAC
CAACAGATTGATCAACTCCATCCCTGGGGCATCGGCAATCCAGAACCGATTTTCTGGACAAAGAATGTACAAATTCTAGA
ACAACGTACCATTGGCAAAAATCACCTAAAATTCAGCCTCGGCCAAACCATCGCCGGTCAAACATTTACCATTAAGGCGA
TCGCCTGGCAATGGGGAGACTATCTGCCACTTCCCCCAACCCTGGACATTGCCTACAAACTCAAAGAAAATCGCTGGAAT
GGTGAGGTGAACCTAGAGCTAGAATTGGTCGGGGCGCGTCCCAGTGAAGCCCCGCGTCCTGCGGTTCCAGACCAGGAAAT
GTCTCCCCAAGCTCAACCCCAGCACTCAGAAAAGACTTTTCTGTTTAATGACCGGACGTATTTCTGTACCCTCGCGGATC
AGGGATTGACCCTCAGAATTCGCAATGATCAAGGTAAGTTATTGGCGATTAAAAAAGGTCAACGGCAGGGCAAACTCGGC
GAGCAAACCGTTGATGTTACCCAACCTCCTTTTTTTCAGATGATCAAAACGGCGATCGCCACCCTCGAACAAGCCAACTA
A

Upstream 100 bases:

>100_bases
TAAATTTTGACTGGGGATGCTAGATCTGACGCAAGGTCTCTAAACGACGAACCGTCTTCTGTACCTACTAACTTTTTTGC
TGCAAACTATCTCCTTTGCC

Downstream 100 bases:

>100_bases
ATCAGCACAAAAAAAGACAACTCCCCCGTCGGTTTGTTGTCCCTGAGCACAATTTGTTTTTGAGAAAAAATTACATATCG
CCGCCACGAATAGCCAGCAA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLPAPLVEFEDLALSVELLQEAI
AEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPSRMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLA
RDLGLDVIITDHHDLPDQLPPANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRIDDPQKVIELLTTDEPGLALE
RAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVLVVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRG
SARGIEEFNVFEALNYCQDLLGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGDYLPLPPTLDIAYKLKENRWN
GEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTFLFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLG
EQTVDVTQPPFFQMIKTAIATLEQAN

Sequences:

>Translated_666_residues
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLPAPLVEFEDLALSVELLQEAI
AEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPSRMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLA
RDLGLDVIITDHHDLPDQLPPANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRIDDPQKVIELLTTDEPGLALE
RAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVLVVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRG
SARGIEEFNVFEALNYCQDLLGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGDYLPLPPTLDIAYKLKENRWN
GEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTFLFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLG
EQTVDVTQPPFFQMIKTAIATLEQAN
>Mature_666_residues
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLPAPLVEFEDLALSVELLQEAI
AEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPSRMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLA
RDLGLDVIITDHHDLPDQLPPANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRIDDPQKVIELLTTDEPGLALE
RAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVLVVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRG
SARGIEEFNVFEALNYCQDLLGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGDYLPLPPTLDIAYKLKENRWN
GEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTFLFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLG
EQTVDVTQPPFFQMIKTAIATLEQAN

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=564, Percent_Identity=34.0425531914894, Blast_Score=290, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 73810; Mature: 73810

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLP
CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
APLVEFEDLALSVELLQEAIAEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPS
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECHH
RMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLARDLGLDVIITDHHDLPDQLP
HCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCC
PANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRI
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCC
DDPQKVIELLTTDEPGLALERAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVL
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEE
VVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRGSARGIEEFNVFEALNYCQDL
EEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCEEECCCCHHHH
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGD
HHHHHCCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEECCCC
YLPLPPTLDIAYKLKENRWNGEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTF
CCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLGEQTVDVTQPPFFQMIKTAIA
EEECCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TLEQAN
HHHCCC
>Mature Secondary Structure
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLP
CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
APLVEFEDLALSVELLQEAIAEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPS
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECHH
RMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLARDLGLDVIITDHHDLPDQLP
HCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCC
PANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRI
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCC
DDPQKVIELLTTDEPGLALERAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVL
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEE
VVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRGSARGIEEFNVFEALNYCQDL
EEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCEEECCCCHHHH
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGD
HHHHHCCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEECCCC
YLPLPPTLDIAYKLKENRWNGEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTF
CCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLGEQTVDVTQPPFFQMIKTAIA
EEECCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TLEQAN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]