| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077593
Identifier: 170077593
GI number: 170077593
Start: 999885
End: 1001255
Strand: Reverse
Name: 170077593
Synonym: SYNPCC7002_A0972
Alternate gene names: NA
Gene position: 1001255-999885 (Counterclockwise)
Preceding gene: 170077596
Following gene: 170077591
Centisome position: 33.29
GC content: 52.15
Gene sequence:
>1371_bases ATGTTTAGTCGCGGTCGCCGTCGTTACTCGTCCCTCGGTCGAAGAAAAAAGAAAAAATCCGTTTCTCCCTGGACGATCCT GGTGGCTGTACCGGTGGTATTGCTCGGCCTCGAAGTGGTGGCTCGGCTTGGGTCTGGCTATTTTGAAGGACAGGATGATC AGCTCTCCCAGGAGGCGATCGCCTACAGCCTAAAATTTGTCGATGACGATCAAAACGTCTACCAAGGGTTAGACAATCGC GGCGAACTTCTCGCCCAGAAAGCCATTGCCACGGGCTACGAACTGGTCGGCAGCCAAGAGAGTGAATTTTTTAGCCTCAA TGAACAAGGTTTCCGGGACGAGGAACCGTTACCCGTTGCCAAACCCCAAGATGAAATTCGTGTGTTTATCCTTGGCAATT CCACCGCCTTTGGTCGGGGTGACCAGACGAACCAAGAGACGATCGCCGCTTTCTCGAACAACGTCTCAAAACCGTGTCAA GACCAACGACAATCCCCCGGCACCTATCGCCCGGACGTTTTCCCTTTCTTTCCGCCGACCCGCAATCGCTTGGCCCAACT GCCCGCCAAAATTCGAGAGGGAAACTACCGTGTGGTGAATGTGGCCGTACCTGGCTATAGCTCTGGCAATGAGTTGGCCC AGCTTGCCCTGAAGATTTTGCCCTACCAGCCGGATTTAATTGTTCTTCTCAACGGCTATGAAGATCTCCTCCTCCCCAGT GACCAAGCGGCCACGGAGATTCCAAAATTAGCAGAATTTGCCAAAAATCCCGATGCCTACTTCCACCAATACCTCAAGGA ATCCTTCCGAAACAAGGCCGAACAAAGTGCTTTAATGCGGGCCGTTTTTGCCTTGACTTCCCCCCGCAAAGCAAACCAGG GGGGCGAAGTGTTTAGCATCCGCGAACGCAACACAACGGGCTTGGCACAACAACTCCCTAACTCCGATGCAGAATTTCAG GAACGCCTAGGGCGCTACCAGGACAATCTGGCGCAGATGGTGGGGCTGTGTGGTGCGGCCCAAATTCCGTTGTTGGTGGC CCTCCAACCAGAAATCACTGGACGCCCTGAAGCTCAACTTGATCCGACGGAAGCAGCGATTCGCCAGCAGCTTGGGGATA ACTACACAGAAAAAATGACCACCTATTACCCCCAGTTTGCTGAGACACTGCAACAACTGGCCCAGGACTTTCCGAATAAT CTAGAGTTTATTGATTTTTATCGCCTTGATAATCAGTTCCCCACACCGACTTTTATCGACCCGATCCACATTAATGCTGC TGCAAATGAGGTGATGGCCGAGCAACTCTACGGGGCGATCGCCAATTTGCCAAAGATGCAGATTATCCCGGAAAATTTCT TCCTCGATTAA
Upstream 100 bases:
>100_bases GTACCCCAAATTCCTTCCCGGAAAAGCACAAATTCCCCATGACAAATGGGCCATCTCCCTTGAAAATAGTTGGAAATTCT CTCGTAAAAGGAAAGCGTAC
Downstream 100 bases:
>100_bases GGGCGACGACGTGGGATAATCCCGGAGCTAGTGAGGACATCACTGAGTTTTGGACAGGCAGATTCTAAGCCAAAGCTGCG GGGATTGTAGGTTTTGCGAT
Product: GDSL-like lipase/acylhydrolase domain-containing protein
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase Domain Protein
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MFSRGRRRYSSLGRRKKKKSVSPWTILVAVPVVLLGLEVVARLGSGYFEGQDDQLSQEAIAYSLKFVDDDQNVYQGLDNR GELLAQKAIATGYELVGSQESEFFSLNEQGFRDEEPLPVAKPQDEIRVFILGNSTAFGRGDQTNQETIAAFSNNVSKPCQ DQRQSPGTYRPDVFPFFPPTRNRLAQLPAKIREGNYRVVNVAVPGYSSGNELAQLALKILPYQPDLIVLLNGYEDLLLPS DQAATEIPKLAEFAKNPDAYFHQYLKESFRNKAEQSALMRAVFALTSPRKANQGGEVFSIRERNTTGLAQQLPNSDAEFQ ERLGRYQDNLAQMVGLCGAAQIPLLVALQPEITGRPEAQLDPTEAAIRQQLGDNYTEKMTTYYPQFAETLQQLAQDFPNN LEFIDFYRLDNQFPTPTFIDPIHINAAANEVMAEQLYGAIANLPKMQIIPENFFLD
Sequences:
>Translated_456_residues MFSRGRRRYSSLGRRKKKKSVSPWTILVAVPVVLLGLEVVARLGSGYFEGQDDQLSQEAIAYSLKFVDDDQNVYQGLDNR GELLAQKAIATGYELVGSQESEFFSLNEQGFRDEEPLPVAKPQDEIRVFILGNSTAFGRGDQTNQETIAAFSNNVSKPCQ DQRQSPGTYRPDVFPFFPPTRNRLAQLPAKIREGNYRVVNVAVPGYSSGNELAQLALKILPYQPDLIVLLNGYEDLLLPS DQAATEIPKLAEFAKNPDAYFHQYLKESFRNKAEQSALMRAVFALTSPRKANQGGEVFSIRERNTTGLAQQLPNSDAEFQ ERLGRYQDNLAQMVGLCGAAQIPLLVALQPEITGRPEAQLDPTEAAIRQQLGDNYTEKMTTYYPQFAETLQQLAQDFPNN LEFIDFYRLDNQFPTPTFIDPIHINAAANEVMAEQLYGAIANLPKMQIIPENFFLD >Mature_456_residues MFSRGRRRYSSLGRRKKKKSVSPWTILVAVPVVLLGLEVVARLGSGYFEGQDDQLSQEAIAYSLKFVDDDQNVYQGLDNR GELLAQKAIATGYELVGSQESEFFSLNEQGFRDEEPLPVAKPQDEIRVFILGNSTAFGRGDQTNQETIAAFSNNVSKPCQ DQRQSPGTYRPDVFPFFPPTRNRLAQLPAKIREGNYRVVNVAVPGYSSGNELAQLALKILPYQPDLIVLLNGYEDLLLPS DQAATEIPKLAEFAKNPDAYFHQYLKESFRNKAEQSALMRAVFALTSPRKANQGGEVFSIRERNTTGLAQQLPNSDAEFQ ERLGRYQDNLAQMVGLCGAAQIPLLVALQPEITGRPEAQLDPTEAAIRQQLGDNYTEKMTTYYPQFAETLQQLAQDFPNN LEFIDFYRLDNQFPTPTFIDPIHINAAANEVMAEQLYGAIANLPKMQIIPENFFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51137; Mature: 51137
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRGRRRYSSLGRRKKKKSVSPWTILVAVPVVLLGLEVVARLGSGYFEGQDDQLSQEAI CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AYSLKFVDDDQNVYQGLDNRGELLAQKAIATGYELVGSQESEFFSLNEQGFRDEEPLPVA HHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC KPQDEIRVFILGNSTAFGRGDQTNQETIAAFSNNVSKPCQDQRQSPGTYRPDVFPFFPPT CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC RNRLAQLPAKIREGNYRVVNVAVPGYSSGNELAQLALKILPYQPDLIVLLNGYEDLLLPS HHHHHHCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC DQAATEIPKLAEFAKNPDAYFHQYLKESFRNKAEQSALMRAVFALTSPRKANQGGEVFSI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE RERNTTGLAQQLPNSDAEFQERLGRYQDNLAQMVGLCGAAQIPLLVALQPEITGRPEAQL ECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC DPTEAAIRQQLGDNYTEKMTTYYPQFAETLQQLAQDFPNNLEFIDFYRLDNQFPTPTFID CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC PIHINAAANEVMAEQLYGAIANLPKMQIIPENFFLD CEEECHHHHHHHHHHHHHHHHCCCCEEEECCHHCCC >Mature Secondary Structure MFSRGRRRYSSLGRRKKKKSVSPWTILVAVPVVLLGLEVVARLGSGYFEGQDDQLSQEAI CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AYSLKFVDDDQNVYQGLDNRGELLAQKAIATGYELVGSQESEFFSLNEQGFRDEEPLPVA HHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC KPQDEIRVFILGNSTAFGRGDQTNQETIAAFSNNVSKPCQDQRQSPGTYRPDVFPFFPPT CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC RNRLAQLPAKIREGNYRVVNVAVPGYSSGNELAQLALKILPYQPDLIVLLNGYEDLLLPS HHHHHHCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC DQAATEIPKLAEFAKNPDAYFHQYLKESFRNKAEQSALMRAVFALTSPRKANQGGEVFSI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE RERNTTGLAQQLPNSDAEFQERLGRYQDNLAQMVGLCGAAQIPLLVALQPEITGRPEAQL ECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC DPTEAAIRQQLGDNYTEKMTTYYPQFAETLQQLAQDFPNNLEFIDFYRLDNQFPTPTFID CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC PIHINAAANEVMAEQLYGAIANLPKMQIIPENFFLD CEEECHHHHHHHHHHHHHHHHCCCCEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA