| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077533
Identifier: 170077533
GI number: 170077533
Start: 943911
End: 944966
Strand: Direct
Name: 170077533
Synonym: SYNPCC7002_A0911
Alternate gene names: NA
Gene position: 943911-944966 (Clockwise)
Preceding gene: 170077532
Following gene: 170077534
Centisome position: 31.38
GC content: 54.92
Gene sequence:
>1056_bases ATGAGCAACTTTAACTTCCCCTCGCCAGAGCCCACGCCCCCCGAGACCGAAGCGAACCTCAATCAGTCTCCGCCCCAGGC CCCCGAGACCGAAGCGACCAGTGCCGTAGATCCGGGTCATTCTGAAAAACAACAACCAGAGTCTGCGAGTCCTAGCCCGA CGATTCCGAAACCGAATCCCAACGCCGATGGCTATGTCATTGCCCACAAACTGAGGCAGCACAACCGCGAACTGGTTAAA ACCGTTGTTCAACTCGAAGAAGCCTTGGCCGAATCCCAAGAAAAACTCCAGGCACACATTATCCGTTCCCGCAGCGCCGA CAGCCTCATTACCCAGCAGAGTGACGAACTGAATACGAGCCAGCAACAGCTTAGTCAGTTGGGGCAAGAACTCGAACAAG CCAAACAAAATGCCCGCCAATACCAAGAGATGCTCGCAGAACTAGAATACAAATTCCAAACTAGCCAAACTCAGTTGGCG AAAATCGAACGCGAATGTGCCCTCCTCCAGGAAGCCTATAACGAACAGCAGCAAAAACTATTCGCCGCCGAACAGGAAAT TAAGGATCTCCAGGTGCGACTCCAGCGGCAACAACGCTACACCTTACAGTACAAATCAGCCCTAGATGAATGCGCGGATA TTCCCGTCGAAAACGATTTGGCGACCGGGAAAGCCTCCATGCCCAAGGCGTCGAATATTCAACCCTGGTCTGAGCCGGAA ACAGCGGCAACCGAGCCAACAATGCCGGCGATCGCCAAAGCAGATCCGAATACCGAAGCTGACCTGGATCGTCAGTTAGC GGCCCTCGAAGAAGAAATTGAAGAAATGGAAGAATCCGCCGGGGCCGCTTCAATCCTAAAGCCCACCATGAGCCTAAAAG CCGCCCTACGGATTACCCCCCCGGTGACCAAACGACGGGTCAGTGCGCCCATGGGCACCCCGGCCAAAGCAGAAACCAAC CACAACTGGCCAGCGCCGACCCTCAACAGTCCCCGGAGCCAGAAGCGGCCGATGTCTGCGGCAGTGGTGGATTTACCAGC CTTTTTACGGAACTAA
Upstream 100 bases:
>100_bases AAATTTTGTCAAAGTCGGCCAAATCCCTTGTTACACTGCAGAGCAAAACCCCATTGCCTCTCCTGTTTCCCTTTCGCGTC CCGTCTACATCAGCACAACT
Downstream 100 bases:
>100_bases TTGCTGTCCTAAATATTGGGTCTCCCTAAGACCCCGTTGGTGATTGACCCAGTGGCGATCGCCAATCTTTTTTTGTCACA ATATTTAACAATAGAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSNFNFPSPEPTPPETEANLNQSPPQAPETEATSAVDPGHSEKQQPESASPSPTIPKPNPNADGYVIAHKLRQHNRELVK TVVQLEEALAESQEKLQAHIIRSRSADSLITQQSDELNTSQQQLSQLGQELEQAKQNARQYQEMLAELEYKFQTSQTQLA KIERECALLQEAYNEQQQKLFAAEQEIKDLQVRLQRQQRYTLQYKSALDECADIPVENDLATGKASMPKASNIQPWSEPE TAATEPTMPAIAKADPNTEADLDRQLAALEEEIEEMEESAGAASILKPTMSLKAALRITPPVTKRRVSAPMGTPAKAETN HNWPAPTLNSPRSQKRPMSAAVVDLPAFLRN
Sequences:
>Translated_351_residues MSNFNFPSPEPTPPETEANLNQSPPQAPETEATSAVDPGHSEKQQPESASPSPTIPKPNPNADGYVIAHKLRQHNRELVK TVVQLEEALAESQEKLQAHIIRSRSADSLITQQSDELNTSQQQLSQLGQELEQAKQNARQYQEMLAELEYKFQTSQTQLA KIERECALLQEAYNEQQQKLFAAEQEIKDLQVRLQRQQRYTLQYKSALDECADIPVENDLATGKASMPKASNIQPWSEPE TAATEPTMPAIAKADPNTEADLDRQLAALEEEIEEMEESAGAASILKPTMSLKAALRITPPVTKRRVSAPMGTPAKAETN HNWPAPTLNSPRSQKRPMSAAVVDLPAFLRN >Mature_350_residues SNFNFPSPEPTPPETEANLNQSPPQAPETEATSAVDPGHSEKQQPESASPSPTIPKPNPNADGYVIAHKLRQHNRELVKT VVQLEEALAESQEKLQAHIIRSRSADSLITQQSDELNTSQQQLSQLGQELEQAKQNARQYQEMLAELEYKFQTSQTQLAK IERECALLQEAYNEQQQKLFAAEQEIKDLQVRLQRQQRYTLQYKSALDECADIPVENDLATGKASMPKASNIQPWSEPET AATEPTMPAIAKADPNTEADLDRQLAALEEEIEEMEESAGAASILKPTMSLKAALRITPPVTKRRVSAPMGTPAKAETNH NWPAPTLNSPRSQKRPMSAAVVDLPAFLRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38916; Mature: 38785
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFNFPSPEPTPPETEANLNQSPPQAPETEATSAVDPGHSEKQQPESASPSPTIPKPNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC NADGYVIAHKLRQHNRELVKTVVQLEEALAESQEKLQAHIIRSRSADSLITQQSDELNTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHH QQQLSQLGQELEQAKQNARQYQEMLAELEYKFQTSQTQLAKIERECALLQEAYNEQQQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAAEQEIKDLQVRLQRQQRYTLQYKSALDECADIPVENDLATGKASMPKASNIQPWSEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAATEPTMPAIAKADPNTEADLDRQLAALEEEIEEMEESAGAASILKPTMSLKAALRITP CCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PVTKRRVSAPMGTPAKAETNHNWPAPTLNSPRSQKRPMSAAVVDLPAFLRN CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SNFNFPSPEPTPPETEANLNQSPPQAPETEATSAVDPGHSEKQQPESASPSPTIPKPNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC NADGYVIAHKLRQHNRELVKTVVQLEEALAESQEKLQAHIIRSRSADSLITQQSDELNTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHH QQQLSQLGQELEQAKQNARQYQEMLAELEYKFQTSQTQLAKIERECALLQEAYNEQQQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAAEQEIKDLQVRLQRQQRYTLQYKSALDECADIPVENDLATGKASMPKASNIQPWSEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAATEPTMPAIAKADPNTEADLDRQLAALEEEIEEMEESAGAASILKPTMSLKAALRITP CCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PVTKRRVSAPMGTPAKAETNHNWPAPTLNSPRSQKRPMSAAVVDLPAFLRN CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA