| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is adhI [H]
Identifier: 170077490
GI number: 170077490
Start: 897454
End: 898563
Strand: Direct
Name: adhI [H]
Synonym: SYNPCC7002_A0868
Alternate gene names: 170077490
Gene position: 897454-898563 (Clockwise)
Preceding gene: 170077489
Following gene: 170077491
Centisome position: 29.84
GC content: 52.34
Gene sequence:
>1110_bases ATGGATGTGAAAGCGGCGATCGCCTATGCAGCAAAAGAACCCCTCAAGGTAGAAACCGTCCAACTCGAACCCCCCAAAGC TGGAGAAGTGCTGGTAGAAATCAAGGCGACGGGGGTTTGTCATACCGATGCCTACACTTTATCTGGGGCCGATCCAGAGG GGCTATTCCCGGCGATCCTAGGCCATGAGGGGGCTGGGGTTGTGGTTGAAGTGGGGCCGGATGTTAAAAGTCTGAAACCG GGCGATCACGTTATTCCCCTCTATGTGCCAGAATGCCGCGAGTGCGAATATTGCCTCAGTTTTAAAACAAATCTCTGTCA GGCAATCCGACTTACCCAAGGCCGGGGCGTGATGCCCGATGGTACCGGACGTTTTTCGATTAATGGTAAGCCGCTGTTTC ACTACATGGGCACCTCCACCTTTGCTAACTACACCGTGGTGCCAGAAATTTCCCTGGCAAAAATCCGCGAAGATGCCCCC TTTGATAAGGTCTGCTACATCGGCTGCGGTGTCACCACGGGGATCGGGGCGGTGATCAATACGGCGAAAGTTGAAGTGGG GTCAAAGGTAATTGTCTTCGGCTTGGGGGGCATTGGCCTAAACGTGATCCAAGGCTGTCGCATGGTGGGGGCAGATATGA TTGTCGGCGTCGATATTAACGACGATAAAAAGGCGATCGCCGAAAAATTTGGTATGACCCATTTCGTCAATCCCAAGGAA GTTGAGGGTGATCTCGTGCCCTATTTAGTGGATTTAACAAAAGGCGGTGCGGACTACACCTTTGAATGTATTGGCAATGT CAACGTGATGCGCCAAGCGCTGGAAAGTTGCCATAAGGGTTGGGGTGTTTCTACTATTGTTGGGGTAGCAGGCGCAGGTC AAGAGATTAGTACCCGACCCTTCCAGTTGGTAACGGGTCGCGTCTGGAAAGGAACCGCCTTCGGGGGCGCGAGGGGCCGT ACCGATGTGCCGAAAATTGTCGATTGGTACATGGAAGGCAAAATCAACATCGATGATCTGATTACCCACACCATGCCCAT TGAGAAGATTAACGAAGCCTTCGATTTGATGCACGCCGGAGAATCTATCCGCAGCGTGGTCACCTTTTAG
Upstream 100 bases:
>100_bases TGTGTTTGCCGATGAACCCCTAGATTTAGCAAAAATCTGTCCCCCCAGTATTTGTCTTTAGAATAGTAACGACTAAAACC AAAATTTAAGGATTGACCCC
Downstream 100 bases:
>100_bases ATCCTCAAAATTGGTAGGGGTTTACCATGGTAAGCCCCCATAGCACGATCAAATTAACGATGACAAACCTTGTTTTAACG AAAGAAACCCTCTGTTTTGG
Product: alcohol dehydrogenase, zinc-binding dehydrogenase family protein
Products: NA
Alternate protein names: Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MDVKAAIAYAAKEPLKVETVQLEPPKAGEVLVEIKATGVCHTDAYTLSGADPEGLFPAILGHEGAGVVVEVGPDVKSLKP GDHVIPLYVPECRECEYCLSFKTNLCQAIRLTQGRGVMPDGTGRFSINGKPLFHYMGTSTFANYTVVPEISLAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEVGSKVIVFGLGGIGLNVIQGCRMVGADMIVGVDINDDKKAIAEKFGMTHFVNPKE VEGDLVPYLVDLTKGGADYTFECIGNVNVMRQALESCHKGWGVSTIVGVAGAGQEISTRPFQLVTGRVWKGTAFGGARGR TDVPKIVDWYMEGKINIDDLITHTMPIEKINEAFDLMHAGESIRSVVTF
Sequences:
>Translated_369_residues MDVKAAIAYAAKEPLKVETVQLEPPKAGEVLVEIKATGVCHTDAYTLSGADPEGLFPAILGHEGAGVVVEVGPDVKSLKP GDHVIPLYVPECRECEYCLSFKTNLCQAIRLTQGRGVMPDGTGRFSINGKPLFHYMGTSTFANYTVVPEISLAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEVGSKVIVFGLGGIGLNVIQGCRMVGADMIVGVDINDDKKAIAEKFGMTHFVNPKE VEGDLVPYLVDLTKGGADYTFECIGNVNVMRQALESCHKGWGVSTIVGVAGAGQEISTRPFQLVTGRVWKGTAFGGARGR TDVPKIVDWYMEGKINIDDLITHTMPIEKINEAFDLMHAGESIRSVVTF >Mature_369_residues MDVKAAIAYAAKEPLKVETVQLEPPKAGEVLVEIKATGVCHTDAYTLSGADPEGLFPAILGHEGAGVVVEVGPDVKSLKP GDHVIPLYVPECRECEYCLSFKTNLCQAIRLTQGRGVMPDGTGRFSINGKPLFHYMGTSTFANYTVVPEISLAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEVGSKVIVFGLGGIGLNVIQGCRMVGADMIVGVDINDDKKAIAEKFGMTHFVNPKE VEGDLVPYLVDLTKGGADYTFECIGNVNVMRQALESCHKGWGVSTIVGVAGAGQEISTRPFQLVTGRVWKGTAFGGARGR TDVPKIVDWYMEGKINIDDLITHTMPIEKINEAFDLMHAGESIRSVVTF
Specific function: Oxidizes long-chain aliphatic alcohols, long-chain hydroxylated fatty acids and S-hydroxymethylglutathione (hmGSH) in increasing order of preference. Shows little or no activity with short-chain aliphatic alcohols [H]
COG id: COG1062
COG function: function code C; Zn-dependent alcohol dehydrogenases, class III
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily [H]
Homologues:
Organism=Homo sapiens, GI71565154, Length=367, Percent_Identity=61.3079019073569, Blast_Score=464, Evalue=1e-131, Organism=Homo sapiens, GI34577061, Length=369, Percent_Identity=47.1544715447154, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI71565152, Length=374, Percent_Identity=47.0588235294118, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI262073058, Length=366, Percent_Identity=46.9945355191257, Blast_Score=354, Evalue=6e-98, Organism=Homo sapiens, GI71743840, Length=366, Percent_Identity=46.9945355191257, Blast_Score=354, Evalue=6e-98, Organism=Homo sapiens, GI4501933, Length=369, Percent_Identity=46.070460704607, Blast_Score=349, Evalue=2e-96, Organism=Homo sapiens, GI4501929, Length=369, Percent_Identity=45.5284552845528, Blast_Score=347, Evalue=1e-95, Organism=Homo sapiens, GI156523966, Length=364, Percent_Identity=45.3296703296703, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI4501939, Length=358, Percent_Identity=45.5307262569832, Blast_Score=332, Evalue=3e-91, Organism=Escherichia coli, GI1786552, Length=369, Percent_Identity=61.2466124661247, Blast_Score=453, Evalue=1e-129, Organism=Escherichia coli, GI1788073, Length=350, Percent_Identity=28.2857142857143, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87082125, Length=366, Percent_Identity=24.5901639344262, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790045, Length=378, Percent_Identity=26.4550264550265, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI226510992, Length=364, Percent_Identity=25, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787863, Length=344, Percent_Identity=24.4186046511628, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786825, Length=398, Percent_Identity=24.3718592964824, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081918, Length=220, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786518, Length=368, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790718, Length=338, Percent_Identity=24.8520710059172, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788075, Length=363, Percent_Identity=24.7933884297521, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146526, Length=373, Percent_Identity=60.3217158176944, Blast_Score=471, Evalue=1e-133, Organism=Caenorhabditis elegans, GI71997431, Length=375, Percent_Identity=60, Blast_Score=466, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17565904, Length=343, Percent_Identity=60.0583090379009, Blast_Score=426, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17562876, Length=373, Percent_Identity=27.6139410187668, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17562584, Length=366, Percent_Identity=27.3224043715847, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71988145, Length=361, Percent_Identity=27.1468144044321, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562878, Length=242, Percent_Identity=28.099173553719, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562582, Length=366, Percent_Identity=24.5901639344262, Blast_Score=75, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320033, Length=367, Percent_Identity=55.5858310626703, Blast_Score=439, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319621, Length=372, Percent_Identity=29.8387096774194, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322619, Length=360, Percent_Identity=30, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=360, Percent_Identity=30, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323099, Length=389, Percent_Identity=28.5347043701799, Blast_Score=99, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6323729, Length=366, Percent_Identity=27.3224043715847, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324486, Length=373, Percent_Identity=27.0777479892761, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6323961, Length=338, Percent_Identity=27.5147928994083, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319257, Length=377, Percent_Identity=25.4641909814324, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319258, Length=265, Percent_Identity=27.1698113207547, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI17737895, Length=368, Percent_Identity=64.1304347826087, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI17137530, Length=356, Percent_Identity=26.123595505618, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014183 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1; =1.1.1.284 [H]
Molecular weight: Translated: 39513; Mature: 39513
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKAAIAYAAKEPLKVETVQLEPPKAGEVLVEIKATGVCHTDAYTLSGADPEGLFPAIL CCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCEEECCCEEECCCCCCCCCHHHH GHEGAGVVVEVGPDVKSLKPGDHVIPLYVPECRECEYCLSFKTNLCQAIRLTQGRGVMPD CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GTGRFSINGKPLFHYMGTSTFANYTVVPEISLAKIREDAPFDKVCYIGCGVTTGIGAVIN CCCEEEECCCEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHE TAKVEVGSKVIVFGLGGIGLNVIQGCRMVGADMIVGVDINDDKKAIAEKFGMTHFVNPKE EEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEECCCHHH VEGDLVPYLVDLTKGGADYTFECIGNVNVMRQALESCHKGWGVSTIVGVAGAGQEISTRP CCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCC FQLVTGRVWKGTAFGGARGRTDVPKIVDWYMEGKINIDDLITHTMPIEKINEAFDLMHAG EEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC ESIRSVVTF HHHHHHHCC >Mature Secondary Structure MDVKAAIAYAAKEPLKVETVQLEPPKAGEVLVEIKATGVCHTDAYTLSGADPEGLFPAIL CCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCEEECCCEEECCCCCCCCCHHHH GHEGAGVVVEVGPDVKSLKPGDHVIPLYVPECRECEYCLSFKTNLCQAIRLTQGRGVMPD CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GTGRFSINGKPLFHYMGTSTFANYTVVPEISLAKIREDAPFDKVCYIGCGVTTGIGAVIN CCCEEEECCCEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHE TAKVEVGSKVIVFGLGGIGLNVIQGCRMVGADMIVGVDINDDKKAIAEKFGMTHFVNPKE EEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEECCCHHH VEGDLVPYLVDLTKGGADYTFECIGNVNVMRQALESCHKGWGVSTIVGVAGAGQEISTRP CCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCC FQLVTGRVWKGTAFGGARGRTDVPKIVDWYMEGKINIDDLITHTMPIEKINEAFDLMHAG EEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC ESIRSVVTF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631716 [H]