| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077422
Identifier: 170077422
GI number: 170077422
Start: 828286
End: 829080
Strand: Direct
Name: 170077422
Synonym: SYNPCC7002_A0800
Alternate gene names: NA
Gene position: 828286-829080 (Clockwise)
Preceding gene: 170077421
Following gene: 170077423
Centisome position: 27.54
GC content: 49.69
Gene sequence:
>795_bases ATGGCAAAATCTGTCCAAGCTCCCAAAGTGCCAGAAATCATCACAGAGTTAACCGAAAACAATTTTTTCTTTCGGGGAAT GGATCCAGATGCACTGCAAAATTGGCTTGATCCAGCAGAATTAATCACTGAGAAACTCTATTCCAGTCGGCCGATCTATA CAGCTTTTCGCCCGAACCACAATTTGGAATTTCTCTACGTGTTACTTGCGGGGGGGCCAGTGATTGTGCGGAGTACGCCC CTCGACCGCATTCTAGCGATCACCTATACGGGCAGTTGTTTTGGGATGCGCAATCTTCCCGTTGGGTTTGGGCAGGTGAG TCGGAGTTTTCCCAGTTTGGTGGAAGCCTACAAAACTACCGATGTGCTGAAAATTCCGGTAGCAACGGTACAACGGATCT ATGACCAGAGTGCTGATTTTCGCGATCGCTATAACCTGAGTTTCGAGTTACGGGAAAAATTCCAGTACCATCTGCTGAAC TGTAGTACCTACCCACCCCAGGCCGTCGCTTCCCTGCTGCGGGCTTTGATTTACCAAGAGCGATCGCTGGCCAATCAACC CCAGAGTAATGGCGTTTTTAGCTTTGATCTCCCCGTAGATATCATTGCCCATGCCTGCCAGTTAAATCACCGCACTGTGG AACAGGTGTTGAAGGGGATGACGAAGGTGGAACTGATCAAGACAGAAAAATCCGCTGAGGGACAAGGGGATCTGATCCAT GTGCTGAATCCAGAAGGCCTCAAGGAAGTCTATAGTGCGACCCGGGATAAAGTGGCTTGGTGGCCATTGCGCTAG
Upstream 100 bases:
>100_bases CTCACCCAGGGGCGATTGATGACTCGGTTACATCGAGCTTTTCGACTAGAATCAGAAGGAAACGCCTGTAGCTTCTGAAT CTAATACGTTTGTAATTTCC
Downstream 100 bases:
>100_bases GCGAGGGAGTCAACCATTGGGGCGATCGCCTAATCACCATTGAAAATCATCTATTTAGCCACCTAAAAATGAAAGGAATC TTACGATTTGCGGCGGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTP LDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLN CSTYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH VLNPEGLKEVYSATRDKVAWWPLR
Sequences:
>Translated_264_residues MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTP LDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLN CSTYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH VLNPEGLKEVYSATRDKVAWWPLR >Mature_263_residues AKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTPL DRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNC STYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIHV LNPEGLKEVYSATRDKVAWWPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29969; Mature: 29838
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNH CCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCC NLEFLYVLLAGGPVIVRSTPLDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTT CCEEEEEEEECCEEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNCSTYPPQAVASLLRALIYQE CEEECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH RSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH HHHHCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCHHHEEEEECCCCCCCCCCEEE VLNPEGLKEVYSATRDKVAWWPLR EECCHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure AKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNH CCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCC NLEFLYVLLAGGPVIVRSTPLDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTT CCEEEEEEEECCEEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNCSTYPPQAVASLLRALIYQE CEEECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH RSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH HHHHCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCHHHEEEEECCCCCCCCCCEEE VLNPEGLKEVYSATRDKVAWWPLR EECCHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA