| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077412
Identifier: 170077412
GI number: 170077412
Start: 817826
End: 818776
Strand: Direct
Name: 170077412
Synonym: SYNPCC7002_A0790
Alternate gene names: NA
Gene position: 817826-818776 (Clockwise)
Preceding gene: 170077411
Following gene: 170077417
Centisome position: 27.19
GC content: 39.01
Gene sequence:
>951_bases ATGGATGAAACACAATGGTGGAATAAGCCTTTAATCGGTGAGACCAGTTTTTCAGAAAAAATTGTGAAACTGATTAGCAA GAAGTCAGTGCCGGAAAAAGTTGTTTTAGCACACCGAAAGTATAATCGCGAAATTAGAGCAAAGGCCTGGCATGTGCAGC GAATCGAACTGAATAAGTTCGACAATGAAGACTTTTTGACCTATGCCAAAATGCGGGTCTTGATCGAGAAAGAACTTGGC GAGTTTAAGGGTTTAAAACGAATTATTCAGTTTTTAGAATTGGCTTTAACAGCGGCGGAAAGTTATTTACTGATTTCTGA AACAGAATTACAGTTTCGCAGTCCGCTTCAAAAAAGTATTTACAAATTTATTTCCCAGGTGCTTGCAACCCAAGATCACC AAACAGTGATCGCTATTCTTCACAAAAAAGTATGGCCTCTGCTCGACCGCATTAAAACAGACAAAGGCCGGATTGTGCTC CAGGAATATTTAAAGGCGATTGATAATGTCGCCCAATATCCAGATGGACTGGAATTGCTGAGGCTTTTTAAGCAGGCAAC CTACAGTTATACGGTCCTGCGGGCGATTTCTAGTATCTCAAAAACCCTAACAAAATCTGATACTTATGATGTGACGCAGC TCAGTTTACACATTCGTGATAATCAAGATGTTTTCAATCATTTGACTGAAATTCTCCAAATTCCAGCAGAACATGATAAC CCCCGTTCCTATGCACGGATGCTGCAATTTATTGCGTTTAAATATCGTTATCAAAAAAATGACATCGAATTTCAAGAGTT ATTGCAGCGGCTACGGGATTGGCAACTTCCTTATCTAAATATTGTTGATTTGCGAAGAGAGTATTCTGCTCAGGATTATA GTTTGCCGCAGGCATTTAAGGAACCAATTCCGGCAGTAGACATTTATGAAAAATACCAACAATATTTATAA
Upstream 100 bases:
>100_bases AAGTCTATTTTTCCCTATCAGCAAACCAAAAAATAGTTTAGGAACAGAAAACACTATCCCGTTCACCAGCAATCAACTCC ATTACTTGCCTTAAATAACC
Downstream 100 bases:
>100_bases GCAGCTTTATTCAGCCAAAACTAAGAATTTCTAGAATATTAGGATTTTTGTAAGGCTTGATGCAGTGACTGTAGTGATGT TTCACTGATGTAATTGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MDETQWWNKPLIGETSFSEKIVKLISKKSVPEKVVLAHRKYNREIRAKAWHVQRIELNKFDNEDFLTYAKMRVLIEKELG EFKGLKRIIQFLELALTAAESYLLISETELQFRSPLQKSIYKFISQVLATQDHQTVIAILHKKVWPLLDRIKTDKGRIVL QEYLKAIDNVAQYPDGLELLRLFKQATYSYTVLRAISSISKTLTKSDTYDVTQLSLHIRDNQDVFNHLTEILQIPAEHDN PRSYARMLQFIAFKYRYQKNDIEFQELLQRLRDWQLPYLNIVDLRREYSAQDYSLPQAFKEPIPAVDIYEKYQQYL
Sequences:
>Translated_316_residues MDETQWWNKPLIGETSFSEKIVKLISKKSVPEKVVLAHRKYNREIRAKAWHVQRIELNKFDNEDFLTYAKMRVLIEKELG EFKGLKRIIQFLELALTAAESYLLISETELQFRSPLQKSIYKFISQVLATQDHQTVIAILHKKVWPLLDRIKTDKGRIVL QEYLKAIDNVAQYPDGLELLRLFKQATYSYTVLRAISSISKTLTKSDTYDVTQLSLHIRDNQDVFNHLTEILQIPAEHDN PRSYARMLQFIAFKYRYQKNDIEFQELLQRLRDWQLPYLNIVDLRREYSAQDYSLPQAFKEPIPAVDIYEKYQQYL >Mature_316_residues MDETQWWNKPLIGETSFSEKIVKLISKKSVPEKVVLAHRKYNREIRAKAWHVQRIELNKFDNEDFLTYAKMRVLIEKELG EFKGLKRIIQFLELALTAAESYLLISETELQFRSPLQKSIYKFISQVLATQDHQTVIAILHKKVWPLLDRIKTDKGRIVL QEYLKAIDNVAQYPDGLELLRLFKQATYSYTVLRAISSISKTLTKSDTYDVTQLSLHIRDNQDVFNHLTEILQIPAEHDN PRSYARMLQFIAFKYRYQKNDIEFQELLQRLRDWQLPYLNIVDLRREYSAQDYSLPQAFKEPIPAVDIYEKYQQYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37554; Mature: 37554
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDETQWWNKPLIGETSFSEKIVKLISKKSVPEKVVLAHRKYNREIRAKAWHVQRIELNKF CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHEEEEECCCC DNEDFLTYAKMRVLIEKELGEFKGLKRIIQFLELALTAAESYLLISETELQFRSPLQKSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCHHHHHH YKFISQVLATQDHQTVIAILHKKVWPLLDRIKTDKGRIVLQEYLKAIDNVAQYPDGLELL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RLFKQATYSYTVLRAISSISKTLTKSDTYDVTQLSLHIRDNQDVFNHLTEILQIPAEHDN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCC PRSYARMLQFIAFKYRYQKNDIEFQELLQRLRDWQLPYLNIVDLRREYSAQDYSLPQAFK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHH EPIPAVDIYEKYQQYL CCCCCHHHHHHHHHCC >Mature Secondary Structure MDETQWWNKPLIGETSFSEKIVKLISKKSVPEKVVLAHRKYNREIRAKAWHVQRIELNKF CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHEEEEECCCC DNEDFLTYAKMRVLIEKELGEFKGLKRIIQFLELALTAAESYLLISETELQFRSPLQKSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCHHHHHH YKFISQVLATQDHQTVIAILHKKVWPLLDRIKTDKGRIVLQEYLKAIDNVAQYPDGLELL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RLFKQATYSYTVLRAISSISKTLTKSDTYDVTQLSLHIRDNQDVFNHLTEILQIPAEHDN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCC PRSYARMLQFIAFKYRYQKNDIEFQELLQRLRDWQLPYLNIVDLRREYSAQDYSLPQAFK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHH EPIPAVDIYEKYQQYL CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA