| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077406
Identifier: 170077406
GI number: 170077406
Start: 810801
End: 811310
Strand: Direct
Name: 170077406
Synonym: SYNPCC7002_A0783
Alternate gene names: NA
Gene position: 810801-811310 (Clockwise)
Preceding gene: 170077404
Following gene: 170077407
Centisome position: 26.95
GC content: 51.57
Gene sequence:
>510_bases ATGGTTCTTGTGGCCGCGCAATTTGTTCGACGTGTGGGAATGATTTTTTTGTTGGCGATCGCCATGATGATTTTTATAAC CCCAGAGGCGATCGCCGCCAGTAAGCTGAACTACACCTATTCGGAACTGCCGAACCATGACTTTGCCCACGAAAATCTCC AGGCAGCGAGCTTTGCCCGGGCCGATGTGCGGGGGAGCGACTTTACTGGCAGTGACCTAAGCCGAGCGATCCTCACCGAA GGCAAATTTATGGAGGCCAATCTCACCGAAGCCAACCTTTCCGAAGCCTTTATGGATCAAGTCAACATGGAAGGTGCAAA CCTCACCAACGCCCTTTTTGTCGATGCCGTTGCACCGGGGACAAATTTTGCCGAAGCGATTATCGACGGGGCTGATTTTT CTGGTGCGCTTCTCGACCGTTACCAACTGTCTGAACTCTGCAAACGAGCCAGCGGCACTAATACCATCACTGGCATTGAC ACCCGCTACAGTCTCAACTGTAAAAATTAG
Upstream 100 bases:
>100_bases GCAAATTTAGCGAATACTACATGGGAGTTCTGGATGTAACCCCCTTGGGGAAGGCTTGTATCCTAGAAAAAGAAAAATAT TTTTTGAGGTTAGTGAAATT
Downstream 100 bases:
>100_bases TCCCCCTGGGAATTAGCAAAATATCCAGGAGATCTTTGGTCGCGATTTTTCAAAAAATCGGGATGATAGGATTTGAACCT ACGACCCCCTCGTCCCGAAC
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVLVAAQFVRRVGMIFLLAIAMMIFITPEAIAASKLNYTYSELPNHDFAHENLQAASFARADVRGSDFTGSDLSRAILTE GKFMEANLTEANLSEAFMDQVNMEGANLTNALFVDAVAPGTNFAEAIIDGADFSGALLDRYQLSELCKRASGTNTITGID TRYSLNCKN
Sequences:
>Translated_169_residues MVLVAAQFVRRVGMIFLLAIAMMIFITPEAIAASKLNYTYSELPNHDFAHENLQAASFARADVRGSDFTGSDLSRAILTE GKFMEANLTEANLSEAFMDQVNMEGANLTNALFVDAVAPGTNFAEAIIDGADFSGALLDRYQLSELCKRASGTNTITGID TRYSLNCKN >Mature_169_residues MVLVAAQFVRRVGMIFLLAIAMMIFITPEAIAASKLNYTYSELPNHDFAHENLQAASFARADVRGSDFTGSDLSRAILTE GKFMEANLTEANLSEAFMDQVNMEGANLTNALFVDAVAPGTNFAEAIIDGADFSGALLDRYQLSELCKRASGTNTITGID TRYSLNCKN
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18332; Mature: 18332
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLVAAQFVRRVGMIFLLAIAMMIFITPEAIAASKLNYTYSELPNHDFAHENLQAASFAR CEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHH ADVRGSDFTGSDLSRAILTEGKFMEANLTEANLSEAFMDQVNMEGANLTNALFVDAVAPG HCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHEEEEECCCC TNFAEAIIDGADFSGALLDRYQLSELCKRASGTNTITGIDTRYSLNCKN CHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCC >Mature Secondary Structure MVLVAAQFVRRVGMIFLLAIAMMIFITPEAIAASKLNYTYSELPNHDFAHENLQAASFAR CEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHH ADVRGSDFTGSDLSRAILTEGKFMEANLTEANLSEAFMDQVNMEGANLTNALFVDAVAPG HCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHEEEEECCCC TNFAEAIIDGADFSGALLDRYQLSELCKRASGTNTITGIDTRYSLNCKN CHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA