| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077384
Identifier: 170077384
GI number: 170077384
Start: 792513
End: 793049
Strand: Direct
Name: 170077384
Synonym: SYNPCC7002_A0761
Alternate gene names: NA
Gene position: 792513-793049 (Clockwise)
Preceding gene: 170077383
Following gene: 170077385
Centisome position: 26.35
GC content: 50.28
Gene sequence:
>537_bases GTGTTTAGGCAAACCCCTTGCTTTCTCTGGTTGTTGACAATATTCCTGGGGCTGGGAGGCTGCTCCTTTGGCAACACCCC CTTAACCCCCGTTTCCCTCAATAGCCGCTTCCACGATGAACAGCCTGCGTTGAGTGGGGACGGTCGCTGGTTAGCCTTCA TTTCCAATCGCCATGGCACCAGTGAACTGCTTTTTTATGATTTAAACCAAAAGCAGTTTGTGGAGTTGCCTAAGCTCAAT CAAAAAAATGCGATCTATGAAAGTCCGAGTCTGAGTCGTACCGGGCGTTACCTCGTTTATCTTTCGAGTCCCCTTGGGAA GCCGGATATTATCCTCTACGATCGAGCGACCCAGCAGTCCGATATTTTGACCCAGGGCTATCGTCATTGGGTGCGGAACC CTCAAATTAGCCCCGATGGCCGCTATGTAGTGTTTGAATCAGCTCGGCGGGGCCAGTGGGATATTGAGGTTTTAGACCGT GGCCCGAATATTGAATTTGATTTACCCCAGGAAGTGATTGTCAATCCGTCGGGTTAA
Upstream 100 bases:
>100_bases ATCCGGCCCCCGACAATCCAGAAATGCCAGAAGGCGATCGCCCCAACAACCCCGTCAATTTCGACTACTAATTGCCCGAA TTTTCTGCCCATTAACGAAC
Downstream 100 bases:
>100_bases CCGCGTCGCCGTAGGCAAGTTGGCGATTGCTTCAGCGGAAAATGTTGAGCCCCATTGCTGTGGGCAATTGTTAACAATGT GAGAAAAAGTCGTCTTGCTC
Product: WD-40-like beta propeller repeat-containing protein
Products: NA
Alternate protein names: WD40 Domain Protein Beta Propeller; WD-40-Like Beta Propeller Repeat-Containing Protein; WD40-Like Beta-Propeller Protein; WD40-Like Beta Propeller; Lipoprotein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFRQTPCFLWLLTIFLGLGGCSFGNTPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLN QKNAIYESPSLSRTGRYLVYLSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLDR GPNIEFDLPQEVIVNPSG
Sequences:
>Translated_178_residues MFRQTPCFLWLLTIFLGLGGCSFGNTPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLN QKNAIYESPSLSRTGRYLVYLSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLDR GPNIEFDLPQEVIVNPSG >Mature_178_residues MFRQTPCFLWLLTIFLGLGGCSFGNTPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLN QKNAIYESPSLSRTGRYLVYLSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLDR GPNIEFDLPQEVIVNPSG
Specific function: Unknown
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20334; Mature: 20334
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRQTPCFLWLLTIFLGLGGCSFGNTPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC SELLFYDLNQKQFVELPKLNQKNAIYESPSLSRTGRYLVYLSSPLGKPDIILYDRATQQS CEEEEEECCHHHEECCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCH DILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLDRGPNIEFDLPQEVIVNPSG HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEECCHHEEECCCC >Mature Secondary Structure MFRQTPCFLWLLTIFLGLGGCSFGNTPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC SELLFYDLNQKQFVELPKLNQKNAIYESPSLSRTGRYLVYLSSPLGKPDIILYDRATQQS CEEEEEECCHHHEECCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCH DILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLDRGPNIEFDLPQEVIVNPSG HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEECCHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA