| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077383
Identifier: 170077383
GI number: 170077383
Start: 791563
End: 792483
Strand: Direct
Name: 170077383
Synonym: SYNPCC7002_A0760
Alternate gene names: NA
Gene position: 791563-792483 (Clockwise)
Preceding gene: 170077380
Following gene: 170077384
Centisome position: 26.31
GC content: 59.72
Gene sequence:
>921_bases ATGGTTAATTTTGGGCTAAATTCCGCCAGTATCTTGGGGATTGCGCTGGCCGCAGCGGGTGCATCCCTCTATTTTTTACG GTCGGTACGCCCAGAACTTTCCCGCGACCACGATATTTTCTTTGCGGCGGTTGGGCTATTGTGCGGCTTCATCCTCCTGT TCCAAGGGTGGCGTTTAGACCCGATTTTGCAATTTGGTCAATTTCTCCTGTCTGGCTCAGCGGTATTTTTCGCCATTGAG TCAATTCGTCTCCGGGGTTTGGCCACAGAGCAGGCCCGCCGCAATACGCCCATTGTGGACGATGAACGGCCCGTCAGTCG GGTTTATCGGGCGGAGCTGGATCAGATTGAGCCTTACCAGGGGGAAGAACGCTATGAACGTCGGTTGCGGGGCTACCCTG AACCCCGTTCGAGTCGGAGCCGGGGTTACGAAGATGAAGCCCCCCGGGGAACGAGTACCCGACCCAGTAGCCGCCCGACC AATCGTCCCCCGACAGATTATGGCGATCGCCCCAGTGGCCGCCCCACTAGTCGTCGTCCCAGTCGCCCCTCCCCTCCCAG CCGACGCCCCCCCCGTCCGGATCGCTATGAAAATGGTGGCTATGATGCCTATGGCCCCAGCGGTAATGTCACCGATGTCT GGTCAGAAGACGCCTGGGATCAAGGCGATCGCCCCGTCGATGAAACGCCCCGTCGGCCCCGCCGCCCCCGACCTGATGAT GAGCCTTCAGCCCCCCGCCGTCCCCGTCGGCCTCGCCCGGATAACTATGGTGCCCCCGACGAAGAAGTGGCCACCGTTGA TTACCAACCCATTGATGGGGCTGCCTTTGGTGAGGATCAAGATTGGGATGATCCGGCCCCCGACAATCCAGAAATGCCAG AAGGCGATCGCCCCAACAACCCCGTCAATTTCGACTACTAA
Upstream 100 bases:
>100_bases GCATTTTGTAACATTGTCCACCTCTGTTTTCATCTGAGATATCTTATAGTCTGGAAACGGAAGCCGTTAGTATAGAAGGT AGAGTCAAGGGAGATCAACA
Downstream 100 bases:
>100_bases TTGCCCGAATTTTCTGCCCATTAACGAACGTGTTTAGGCAAACCCCTTGCTTTCTCTGGTTGTTGACAATATTCCTGGGG CTGGGAGGCTGCTCCTTTGG
Product: Ycf66-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MVNFGLNSASILGIALAAAGASLYFLRSVRPELSRDHDIFFAAVGLLCGFILLFQGWRLDPILQFGQFLLSGSAVFFAIE SIRLRGLATEQARRNTPIVDDERPVSRVYRAELDQIEPYQGEERYERRLRGYPEPRSSRSRGYEDEAPRGTSTRPSSRPT NRPPTDYGDRPSGRPTSRRPSRPSPPSRRPPRPDRYENGGYDAYGPSGNVTDVWSEDAWDQGDRPVDETPRRPRRPRPDD EPSAPRRPRRPRPDNYGAPDEEVATVDYQPIDGAAFGEDQDWDDPAPDNPEMPEGDRPNNPVNFDY
Sequences:
>Translated_306_residues MVNFGLNSASILGIALAAAGASLYFLRSVRPELSRDHDIFFAAVGLLCGFILLFQGWRLDPILQFGQFLLSGSAVFFAIE SIRLRGLATEQARRNTPIVDDERPVSRVYRAELDQIEPYQGEERYERRLRGYPEPRSSRSRGYEDEAPRGTSTRPSSRPT NRPPTDYGDRPSGRPTSRRPSRPSPPSRRPPRPDRYENGGYDAYGPSGNVTDVWSEDAWDQGDRPVDETPRRPRRPRPDD EPSAPRRPRRPRPDNYGAPDEEVATVDYQPIDGAAFGEDQDWDDPAPDNPEMPEGDRPNNPVNFDY >Mature_306_residues MVNFGLNSASILGIALAAAGASLYFLRSVRPELSRDHDIFFAAVGLLCGFILLFQGWRLDPILQFGQFLLSGSAVFFAIE SIRLRGLATEQARRNTPIVDDERPVSRVYRAELDQIEPYQGEERYERRLRGYPEPRSSRSRGYEDEAPRGTSTRPSSRPT NRPPTDYGDRPSGRPTSRRPSRPSPPSRRPPRPDRYENGGYDAYGPSGNVTDVWSEDAWDQGDRPVDETPRRPRRPRPDD EPSAPRRPRRPRPDNYGAPDEEVATVDYQPIDGAAFGEDQDWDDPAPDNPEMPEGDRPNNPVNFDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf66 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010004 [H]
Pfam domain/function: PF07444 Ycf66_N [H]
EC number: NA
Molecular weight: Translated: 34615; Mature: 34615
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNFGLNSASILGIALAAAGASLYFLRSVRPELSRDHDIFFAAVGLLCGFILLFQGWRLD CCCCCCCCHHHHHHHHHHHCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC PILQFGQFLLSGSAVFFAIESIRLRGLATEQARRNTPIVDDERPVSRVYRAELDQIEPYQ HHHHHHHHHHCCCHHEEHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC GEERYERRLRGYPEPRSSRSRGYEDEAPRGTSTRPSSRPTNRPPTDYGDRPSGRPTSRRP CHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRPSPPSRRPPRPDRYENGGYDAYGPSGNVTDVWSEDAWDQGDRPVDETPRRPRRPRPDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPSAPRRPRRPRPDNYGAPDEEVATVDYQPIDGAAFGEDQDWDDPAPDNPEMPEGDRPNN CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVNFDY CCCCCC >Mature Secondary Structure MVNFGLNSASILGIALAAAGASLYFLRSVRPELSRDHDIFFAAVGLLCGFILLFQGWRLD CCCCCCCCHHHHHHHHHHHCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC PILQFGQFLLSGSAVFFAIESIRLRGLATEQARRNTPIVDDERPVSRVYRAELDQIEPYQ HHHHHHHHHHCCCHHEEHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC GEERYERRLRGYPEPRSSRSRGYEDEAPRGTSTRPSSRPTNRPPTDYGDRPSGRPTSRRP CHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRPSPPSRRPPRPDRYENGGYDAYGPSGNVTDVWSEDAWDQGDRPVDETPRRPRRPRPDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPSAPRRPRRPRPDNYGAPDEEVATVDYQPIDGAAFGEDQDWDDPAPDNPEMPEGDRPNN CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVNFDY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]