Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077354

Identifier: 170077354

GI number: 170077354

Start: 762043

End: 762525

Strand: Direct

Name: 170077354

Synonym: SYNPCC7002_A0731

Alternate gene names: NA

Gene position: 762043-762525 (Clockwise)

Preceding gene: 170077346

Following gene: 170077364

Centisome position: 25.33

GC content: 50.52

Gene sequence:

>483_bases
GTGTTGTCTATGGCGATCGCCTTCAAAGTTAGTCGGTGGTGTCTTAGCGGCTTCATCGCAGTAAATTTAATCGGCTGTAC
TCCTTGGACAGTTTTATCTCAACAGGAAAACCTGGGCACAACCAGGCAGCCCATCGCCAGTCTTGGGGCCGTGTCACCGG
GGGCTGAGGTCTATGTCCAGGGAACTGTAACCCAGCGGGTGCCTCTCCTCGATCAAGGTGCTTACGAATTGCAGGACAGC
ACCGGGCGCATTTGGGTGATTACGGAAACTCCGCTGCCGGAGCCTGGGGCAGAATTGGCGATCGCCGGGCAATTACAATT
CCATGAGTTGCAACTCCAGCAACAAAATTTTGGGGAATTTTTTATTCAAGAACAGGCGATTATCGACACCGTAGAAGAGG
GAACGATTTCACCGCCACAATTACCCATTAAAGAACACCTTGATCTGCAGTTTTTACCCCACAAAGGCAATCAAAAATCC
TGA

Upstream 100 bases:

>100_bases
CTTTGGAAACATTGATCACTGGTCCCAAGATTTTTGAAGCTTCTGGGGAATCGAGTACACTGGATATACTTTTTTGATTT
TGTGATGCGTTTATAAGCTT

Downstream 100 bases:

>100_bases
AGATCAAGGTGTTAGTAAATAACATTTAAGAATCAAGGTTTCGCACAAGTAATCCTAAGCATCGGAGCCGGATTCACTGG
TTTCTTTTTGTTCGTCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLSMAIAFKVSRWCLSGFIAVNLIGCTPWTVLSQQENLGTTRQPIASLGAVSPGAEVYVQGTVTQRVPLLDQGAYELQDS
TGRIWVITETPLPEPGAELAIAGQLQFHELQLQQQNFGEFFIQEQAIIDTVEEGTISPPQLPIKEHLDLQFLPHKGNQKS

Sequences:

>Translated_160_residues
MLSMAIAFKVSRWCLSGFIAVNLIGCTPWTVLSQQENLGTTRQPIASLGAVSPGAEVYVQGTVTQRVPLLDQGAYELQDS
TGRIWVITETPLPEPGAELAIAGQLQFHELQLQQQNFGEFFIQEQAIIDTVEEGTISPPQLPIKEHLDLQFLPHKGNQKS
>Mature_160_residues
MLSMAIAFKVSRWCLSGFIAVNLIGCTPWTVLSQQENLGTTRQPIASLGAVSPGAEVYVQGTVTQRVPLLDQGAYELQDS
TGRIWVITETPLPEPGAELAIAGQLQFHELQLQQQNFGEFFIQEQAIIDTVEEGTISPPQLPIKEHLDLQFLPHKGNQKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17597; Mature: 17597

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMAIAFKVSRWCLSGFIAVNLIGCTPWTVLSQQENLGTTRQPIASLGAVSPGAEVYVQ
CCCCHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEE
GTVTQRVPLLDQGAYELQDSTGRIWVITETPLPEPGAELAIAGQLQFHELQLQQQNFGEF
ECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEECCEEEEEEHCCCCCCCHH
FIQEQAIIDTVEEGTISPPQLPIKEHLDLQFLPHKGNQKS
EEHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCCC
>Mature Secondary Structure
MLSMAIAFKVSRWCLSGFIAVNLIGCTPWTVLSQQENLGTTRQPIASLGAVSPGAEVYVQ
CCCCHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEE
GTVTQRVPLLDQGAYELQDSTGRIWVITETPLPEPGAELAIAGQLQFHELQLQQQNFGEF
ECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEECCEEEEEEHCCCCCCCHH
FIQEQAIIDTVEEGTISPPQLPIKEHLDLQFLPHKGNQKS
EEHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA