| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077306
Identifier: 170077306
GI number: 170077306
Start: 712243
End: 713127
Strand: Direct
Name: 170077306
Synonym: SYNPCC7002_A0683
Alternate gene names: NA
Gene position: 712243-713127 (Clockwise)
Preceding gene: 170077303
Following gene: 170077319
Centisome position: 23.68
GC content: 49.49
Gene sequence:
>885_bases ATGGCAGAAGAATTTTACAAAGGTGGACAACGGGCTTGGTTCCATGATCAGGGCCATTGGGGCGGTTTTTTCCATACCTA TGATCAGTTGCAACTCAAGGGTTTTGGGGCGCATTTTGATCAACCCCGCAAAATCCATGTCTTTTTACCACGAGATTATG AAGTAACTGGCGATCGCCTGCCCGTACTTTACTGCAACGATGGCGACCATATTTTTTTCCCCGATGGGAATTTTGGTCAA TGTTGGCAGGTGGCAGAACGCTTGAGTCGACTGTATCTACGGGAGCAATTGCAAAAACTGATTGTCGTGGCCATTTGCCC CAATGATCGTGCCTACGAATATTCCCATATCCCGGATCAAGGTGGTGGCCTAGGGGATTACAGTCGTTATCTTGCCAAAG GACTGAAACCCTTTATCGATGAGCAATACCGCACCCAAACCGATCAAACGCTCATCGTCGGTGCTGCCCAAGGCGGGTTG GCTGCTTTTTACACGGCTACCCAGCACCCCCGCCAGTTTCCCCAAGTGGCCGCTTTATCCCCCTCTTTTTGGCTGGGACT GGAGGCAAACCCAATGTCCATAAATGGTTTGGATGGGGCTTTTAAAATATCCCTTGAAAATTCGGCGTTGGTTTTTGCCG CGACTCCCGTTTTGAGCAATCCTGAACTGCGCCCCAAAATTTACCTAGACTGGGGTTTAATGGCTGATACCCAGCACCAG GAGGCCCGGGCGAGATTACGGGGCCAAGAAATGCGATCGCTTTTAATCGAAGAGTTCCAATACCAAGAAAATGTGAATCT TTTTACCCTTGAAGATCCCCTTGGTCGCCACGATGAACTTGCCTGGGGCGATCGCCTTGAGACAATTTTGCAGCTTTTCT TCTAG
Upstream 100 bases:
>100_bases TTCCACTGCAAAACCTAGGCTTAGTAGAAGGTGAGCATCCGTTGTTTTTGGAATTTTTGGGTTAGGGGATGGGTTGAACC CAGCAGGTTAAAGAACATCT
Downstream 100 bases:
>100_bases CCCGTGGGCAAAAATCTGACCTCTAATACTGAATGCGATCGGTGGTTTTCCCAGGAGCGGCATTCTTTTCGAGATATTCA ATAATTTTTCCGGCCACATC
Product: carbohydrate esterase family 1 protein
Products: NA
Alternate protein names: Alpha-Dextrin Endo-1 6-Alpha-Glucosidase; Hydrolase; Carbohydrate Esterase; Esterase Superfamily; Esterase Family Protein; Carbohydrate Esterase Family 1 Protein; Esterase Hydrolase Of Alpha/Beta Superfamily; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Superfamily Hydrolase Esterase; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAEEFYKGGQRAWFHDQGHWGGFFHTYDQLQLKGFGAHFDQPRKIHVFLPRDYEVTGDRLPVLYCNDGDHIFFPDGNFGQ CWQVAERLSRLYLREQLQKLIVVAICPNDRAYEYSHIPDQGGGLGDYSRYLAKGLKPFIDEQYRTQTDQTLIVGAAQGGL AAFYTATQHPRQFPQVAALSPSFWLGLEANPMSINGLDGAFKISLENSALVFAATPVLSNPELRPKIYLDWGLMADTQHQ EARARLRGQEMRSLLIEEFQYQENVNLFTLEDPLGRHDELAWGDRLETILQLFF
Sequences:
>Translated_294_residues MAEEFYKGGQRAWFHDQGHWGGFFHTYDQLQLKGFGAHFDQPRKIHVFLPRDYEVTGDRLPVLYCNDGDHIFFPDGNFGQ CWQVAERLSRLYLREQLQKLIVVAICPNDRAYEYSHIPDQGGGLGDYSRYLAKGLKPFIDEQYRTQTDQTLIVGAAQGGL AAFYTATQHPRQFPQVAALSPSFWLGLEANPMSINGLDGAFKISLENSALVFAATPVLSNPELRPKIYLDWGLMADTQHQ EARARLRGQEMRSLLIEEFQYQENVNLFTLEDPLGRHDELAWGDRLETILQLFF >Mature_293_residues AEEFYKGGQRAWFHDQGHWGGFFHTYDQLQLKGFGAHFDQPRKIHVFLPRDYEVTGDRLPVLYCNDGDHIFFPDGNFGQC WQVAERLSRLYLREQLQKLIVVAICPNDRAYEYSHIPDQGGGLGDYSRYLAKGLKPFIDEQYRTQTDQTLIVGAAQGGLA AFYTATQHPRQFPQVAALSPSFWLGLEANPMSINGLDGAFKISLENSALVFAATPVLSNPELRPKIYLDWGLMADTQHQE ARARLRGQEMRSLLIEEFQYQENVNLFTLEDPLGRHDELAWGDRLETILQLFF
Specific function: Unknown
COG id: COG2819
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33694; Mature: 33563
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEFYKGGQRAWFHDQGHWGGFFHTYDQLQLKGFGAHFDQPRKIHVFLPRDYEVTGDRL CCCHHHCCCCEEEECCCCCCCCCCEECCEEEEEECCCCCCCCCEEEEEECCCCEECCCEE PVLYCNDGDHIFFPDGNFGQCWQVAERLSRLYLREQLQKLIVVAICPNDRAYEYSHIPDQ EEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCC GGGLGDYSRYLAKGLKPFIDEQYRTQTDQTLIVGAAQGGLAAFYTATQHPRQFPQVAALS CCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHCCHHHCCC PSFWLGLEANPMSINGLDGAFKISLENSALVFAATPVLSNPELRPKIYLDWGLMADTQHQ CCEEEEEECCCCEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHH EARARLRGQEMRSLLIEEFQYQENVNLFTLEDPLGRHDELAWGDRLETILQLFF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure AEEFYKGGQRAWFHDQGHWGGFFHTYDQLQLKGFGAHFDQPRKIHVFLPRDYEVTGDRL CCHHHCCCCEEEECCCCCCCCCCEECCEEEEEECCCCCCCCCEEEEEECCCCEECCCEE PVLYCNDGDHIFFPDGNFGQCWQVAERLSRLYLREQLQKLIVVAICPNDRAYEYSHIPDQ EEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCC GGGLGDYSRYLAKGLKPFIDEQYRTQTDQTLIVGAAQGGLAAFYTATQHPRQFPQVAALS CCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHCCHHHCCC PSFWLGLEANPMSINGLDGAFKISLENSALVFAATPVLSNPELRPKIYLDWGLMADTQHQ CCEEEEEECCCCEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHH EARARLRGQEMRSLLIEEFQYQENVNLFTLEDPLGRHDELAWGDRLETILQLFF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA