| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is thrS [H]
Identifier: 170077251
GI number: 170077251
Start: 657566
End: 659380
Strand: Reverse
Name: thrS [H]
Synonym: SYNPCC7002_A0628
Alternate gene names: 170077251
Gene position: 659380-657566 (Counterclockwise)
Preceding gene: 170077252
Following gene: 170077250
Centisome position: 21.92
GC content: 51.74
Gene sequence:
>1815_bases ATGGATCAGGTGAATGGTGAACAACTCGAACCGATGAAACTTCCCAAAACCAGTGAATCAGACACCCTCAAGCGGATTCG TCACACCACCTCCCACGTCATGGCGATGGCAGTGCAAAAGCTATTTCCCGACGCCCAGGTCACCATTGGTCCTTGGACAG AGAATGGGTTTTACTACGATTTTGATAAGCCAGAACCCTTCACCGAAGCGGATCTCAAGGCAATCAAAAAAGAGATGGTA AAAATCGTCAAGAAAAAATTGCCTGTCGTTCGTGAAGAAATTTCCCGCGCCGAAGCCGAAAAACGGATCAAGGAAATTAA CGAACCCTACAAACTCGAAATCCTCGCAGGAATTCACGACCCCATCACCCTCTACTACCTCGGCGATCAATGGTGGGATC TTTGTGCTGGCCCCCACGTGGAAAATACCGGTGATATTAACCCCAAGGCGATCGCCCTCGAATCGGTCGCCGGAGCCTAC TGGCGGGGTGACGAAAATAACCAGCAACTCCAGCGTATTTACGGCACCGCTTGGGAAACCCCCGAACAGCTCAAAGAATA CCAACGCCGCAAAGAGGAAGCCCTCAAACGCGACCACCGCAAACTCGGCAGAGAACTGGGTTTGTTTATGTTCTCCGATC AAGTCGGCCCCGGCTTACCCCTCTGGACGCCGAAGGGAACTTTGATCCGTTCCACCCTCGAAAATTTCCTCAAGGCAGAG CAAACTAAACGCGGCTACCAAGGTGTCGTGACTCCCCACATCGCCCGCGTGGATCTCTTTAAAGTATCCGGTCACTGGCA GAATTACCGCGAGGATATGTTCCCGATGATGGCGGATGGCGACGCAGAACGGGCGGCGGAACAGGGTTTTGTGATGAAGC CGATGAACTGCCCCTTTCACATCCAAATTTATAAGGATCAACTGCGTTCCTATCGGGAATTGCCGATCCGTTTGGCAGAA TTTGGCACGGTTTATCGTTACGAGCAATCCGGTGAATTGGGTGGTTTAACGCGAGTGCGGGGCTTTACCGTGGACGATTC TCACCTTTTCGTTACGCCAGATCAACTGGAAGCAGAATTCTTTAACGTGGTTGATTTAATTTTGACCGTCTTTAAGAGTT TGCAACTGAAAAATTTCAAGGCGCGACTAAGCTTCCGTGACCCCAACTCCGATAAATATATTGGCTCCGATGAGGTCTGG GAAAAGGCGCAAAACGCAATCCGTAAAGCCGTCACCAAGCTCGACATGGACTATTTTGAAGCCGAAGGGGAAGCGGCGTT CTACGGCCCGAAACTGGACTTTATTTTCCAAGATGTCCTCGAACGGGAATGGCAATTGGGCACGGTACAGGTGGATTACA ATCTCCCCGAACGGTTTGAATTGGAATATGTTACTGAGCATGGCGATCGCCAACGGCCGATCATGATCCACCGCGCGCCC TTCGGCTCCTTGGAGCGATTGATCGGCATTCTGATCGAAGAATATGCGGGTGATTTTCCTCTATGGCTCGCCCCCGAACA GGTCAGAATTCTTCCCGTCAGTGATGAATTTTACGATTACGCCAAGGAACAAGCCGCGAAACTGCAAGCTATGGGGATTC GGGCCGTGGCTGATGCCTCTGGGGAACGTCTGGGCAAATTGATCCGCAACGCCGAAAAACAGAAAATCCCCGTCATGGCG ATCGCCGGGGCGAAGGAAGTCGAAGCCAATAGCCTCAGTATCCGCACCCGTGCCTCTGGGGAACTCGGTGCGATTCCGAT GGAGGAAGTGATTTCCCGCCTCATCGAAGCCAACACGAACCACACCAATTTCTAA
Upstream 100 bases:
>100_bases TCGGTAAAGGAAAAGTCCCCAGTCCAGCAGGGACAACGGATAATATAGAATGGCGACCTGCTAAACTTTTTGGAGCAATT TTAAGGAGCATATTTCAACC
Downstream 100 bases:
>100_bases TATCCGTAGGGGTTTACCACGGTAAACCCTTTTTCGCTTCATTGCGAGGGCTAAATTATGACCCAGGCAAAATCAAAAAT CCTCTATGATCAAGACTTTT
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MDQVNGEQLEPMKLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYDFDKPEPFTEADLKAIKKEMV KIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIHDPITLYYLGDQWWDLCAGPHVENTGDINPKAIALESVAGAY WRGDENNQQLQRIYGTAWETPEQLKEYQRRKEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAE QTKRGYQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRSYRELPIRLAE FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVDLILTVFKSLQLKNFKARLSFRDPNSDKYIGSDEVW EKAQNAIRKAVTKLDMDYFEAEGEAAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAP FGSLERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADASGERLGKLIRNAEKQKIPVMA IAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANTNHTNF
Sequences:
>Translated_604_residues MDQVNGEQLEPMKLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYDFDKPEPFTEADLKAIKKEMV KIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIHDPITLYYLGDQWWDLCAGPHVENTGDINPKAIALESVAGAY WRGDENNQQLQRIYGTAWETPEQLKEYQRRKEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAE QTKRGYQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRSYRELPIRLAE FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVDLILTVFKSLQLKNFKARLSFRDPNSDKYIGSDEVW EKAQNAIRKAVTKLDMDYFEAEGEAAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAP FGSLERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADASGERLGKLIRNAEKQKIPVMA IAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANTNHTNF >Mature_604_residues MDQVNGEQLEPMKLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYDFDKPEPFTEADLKAIKKEMV KIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIHDPITLYYLGDQWWDLCAGPHVENTGDINPKAIALESVAGAY WRGDENNQQLQRIYGTAWETPEQLKEYQRRKEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAE QTKRGYQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRSYRELPIRLAE FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVDLILTVFKSLQLKNFKARLSFRDPNSDKYIGSDEVW EKAQNAIRKAVTKLDMDYFEAEGEAAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAP FGSLERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADASGERLGKLIRNAEKQKIPVMA IAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANTNHTNF
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=573, Percent_Identity=37.696335078534, Blast_Score=384, Evalue=1e-106, Organism=Homo sapiens, GI20070344, Length=628, Percent_Identity=35.9872611464968, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI38570111, Length=571, Percent_Identity=35.9019264448336, Blast_Score=370, Evalue=1e-102, Organism=Escherichia coli, GI1788013, Length=603, Percent_Identity=39.6351575456053, Blast_Score=467, Evalue=1e-132, Organism=Caenorhabditis elegans, GI71984184, Length=586, Percent_Identity=35.6655290102389, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71984192, Length=586, Percent_Identity=35.6655290102389, Blast_Score=390, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322112, Length=610, Percent_Identity=36.0655737704918, Blast_Score=380, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6322654, Length=422, Percent_Identity=35.0710900473934, Blast_Score=244, Evalue=3e-65, Organism=Drosophila melanogaster, GI24583842, Length=571, Percent_Identity=38.7040280210158, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI28574141, Length=571, Percent_Identity=38.7040280210158, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI24583839, Length=571, Percent_Identity=38.7040280210158, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 69352; Mature: 69352
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00018 EF_HAND_1 ; PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQVNGEQLEPMKLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE FDKPEPFTEADLKAIKKEMVKIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIHD CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC PITLYYLGDQWWDLCAGPHVENTGDINPKAIALESVAGAYWRGDENNQQLQRIYGTAWET CEEEEEECCHHHHHHCCCCCCCCCCCCCHHEEHHHHCCHHCCCCCCHHHHHHHHCCCCCC PEQLKEYQRRKEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAE HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH QTKRGYQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFH HHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHCCCEECCCCCCEE IQIYKDQLRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEF EEEHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEECCHHHHHHH FNVVDLILTVFKSLQLKNFKARLSFRDPNSDKYIGSDEVWEKAQNAIRKAVTKLDMDYFE HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEGEAAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAP CCCCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCEEEEECC FGSLERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADAS CHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC GERLGKLIRNAEKQKIPVMAIAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANTN HHHHHHHHHCCHHHCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCC HTNF CCCC >Mature Secondary Structure MDQVNGEQLEPMKLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE FDKPEPFTEADLKAIKKEMVKIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIHD CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC PITLYYLGDQWWDLCAGPHVENTGDINPKAIALESVAGAYWRGDENNQQLQRIYGTAWET CEEEEEECCHHHHHHCCCCCCCCCCCCCHHEEHHHHCCHHCCCCCCHHHHHHHHCCCCCC PEQLKEYQRRKEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAE HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH QTKRGYQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFH HHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHCCCEECCCCCCEE IQIYKDQLRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEF EEEHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEECCHHHHHHH FNVVDLILTVFKSLQLKNFKARLSFRDPNSDKYIGSDEVWEKAQNAIRKAVTKLDMDYFE HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEGEAAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAP CCCCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCEEEEECC FGSLERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADAS CHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC GERLGKLIRNAEKQKIPVMAIAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANTN HHHHHHHHHCCHHHCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCC HTNF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]