| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077228
Identifier: 170077228
GI number: 170077228
Start: 632542
End: 633531
Strand: Direct
Name: 170077228
Synonym: SYNPCC7002_A0603
Alternate gene names: NA
Gene position: 632542-633531 (Clockwise)
Preceding gene: 170077224
Following gene: 170077229
Centisome position: 21.03
GC content: 53.43
Gene sequence:
>990_bases ATGGTCTGCTCGGATTTCCCCGTCATTTACTCCACGCTATCGGCGATCGCCCTCCGGGAGCGTGTGCTGCCGCAATATGG CCTTAAGACCGTCAGCCAATGTGAGTTATGGAATCGGGGCTTGAGTGATATTTATTTTGTGCAAGCAGCCCAGGATACGT TTGTCTTGCGGGTCTCCCATCACCATTGGCGATCGCCCACGGAAATTTTTTTCGAGCTCGATTTTTTAAATTTTCTCAAG GCCCAGGGTTTACCGGTGGCGGCTCCTTTACCGACGGAAGCTGGTGAATGGGCGGTCAAAATTCAGGCTCCAGAAGGCGA TCGCTATGCCACTCTGTTTCCCTTTGCCCCAGGGGAAATTGCCCTAGGGGGGTGGAACGAAAGCCAAAGTCGTCATTTAG GGGCAGTGGTGGCGCAGATCCATCAGGTCAGCCAAGACTTTATCTGTGACCACCCGCGCAAACCCCTAGACCTTGAGTAT TTGTTGGATGAATCCTTGGGCGTGATTTTGCCGTTTTTTGGCGATCGCCCCCGGGATTGGGGTTTCATGCAGGACATTGC CCACAAAATCCGTGAAACTTTAGCGCAACTCCCCAAGGAAAAGCCCCTCTGGTCGGTCTGTTGGGGTGATGCCCACTGCG GCAACGTCCATTTCACCGAAGATCATCAGCTCACCCTCTTCGACTTTGACCAATGCGGCTACGGTTGGCGCGCCTTTGAA ATTGGCAAATTTTTCCAGGGGGCACTCACCACAGGTCTCCAGCGACGGGTGCGAGAAGCCTTTATCGCGGGCTATGAGTC CCAAACCACCTTTGTCGCCCAGGAACAGGCGGCCCTCCAGGCCCTCACCCAACTGGCTTATATTTGGTCGTGGCGCATCA GTCTCACCAGTATTCAAATTTTTAACAACAGCCAACTGGATCGTCACTACCTCACCCAGCGGCTAGAACGGCTCAAGGCT TTATCTTCGCGGGATTGGCAATTATTCTAA
Upstream 100 bases:
>100_bases TCTTGATGTTCTGGAAGATGGTGCCATGGGCTACAGATTTTTGGCCCATATCTTTTTAGGTTGATAGTTGATTTGTCCTG CACCTGAGGGGCTGCGGTCT
Downstream 100 bases:
>100_bases ATCTCCCCAGTGATAAATCTATGTGACATGACCCAGGCTGAGGGAAAATATCGCGAAAAGTTGAAAAATTCCCTGATCAA AAATGGTATGTTCTGCTACA
Product: putative homoserine kinase type II (protein kinase fold)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVCSDFPVIYSTLSAIALRERVLPQYGLKTVSQCELWNRGLSDIYFVQAAQDTFVLRVSHHHWRSPTEIFFELDFLNFLK AQGLPVAAPLPTEAGEWAVKIQAPEGDRYATLFPFAPGEIALGGWNESQSRHLGAVVAQIHQVSQDFICDHPRKPLDLEY LLDESLGVILPFFGDRPRDWGFMQDIAHKIRETLAQLPKEKPLWSVCWGDAHCGNVHFTEDHQLTLFDFDQCGYGWRAFE IGKFFQGALTTGLQRRVREAFIAGYESQTTFVAQEQAALQALTQLAYIWSWRISLTSIQIFNNSQLDRHYLTQRLERLKA LSSRDWQLF
Sequences:
>Translated_329_residues MVCSDFPVIYSTLSAIALRERVLPQYGLKTVSQCELWNRGLSDIYFVQAAQDTFVLRVSHHHWRSPTEIFFELDFLNFLK AQGLPVAAPLPTEAGEWAVKIQAPEGDRYATLFPFAPGEIALGGWNESQSRHLGAVVAQIHQVSQDFICDHPRKPLDLEY LLDESLGVILPFFGDRPRDWGFMQDIAHKIRETLAQLPKEKPLWSVCWGDAHCGNVHFTEDHQLTLFDFDQCGYGWRAFE IGKFFQGALTTGLQRRVREAFIAGYESQTTFVAQEQAALQALTQLAYIWSWRISLTSIQIFNNSQLDRHYLTQRLERLKA LSSRDWQLF >Mature_329_residues MVCSDFPVIYSTLSAIALRERVLPQYGLKTVSQCELWNRGLSDIYFVQAAQDTFVLRVSHHHWRSPTEIFFELDFLNFLK AQGLPVAAPLPTEAGEWAVKIQAPEGDRYATLFPFAPGEIALGGWNESQSRHLGAVVAQIHQVSQDFICDHPRKPLDLEY LLDESLGVILPFFGDRPRDWGFMQDIAHKIRETLAQLPKEKPLWSVCWGDAHCGNVHFTEDHQLTLFDFDQCGYGWRAFE IGKFFQGALTTGLQRRVREAFIAGYESQTTFVAQEQAALQALTQLAYIWSWRISLTSIQIFNNSQLDRHYLTQRLERLKA LSSRDWQLF
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 37769; Mature: 37769
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCSDFPVIYSTLSAIALRERVLPQYGLKTVSQCELWNRGLSDIYFVQAAQDTFVLRVSH CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECC HHWRSPTEIFFELDFLNFLKAQGLPVAAPLPTEAGEWAVKIQAPEGDRYATLFPFAPGEI CCCCCCHHEEEEEHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCCE ALGGWNESQSRHLGAVVAQIHQVSQDFICDHPRKPLDLEYLLDESLGVILPFFGDRPRDW EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCC GFMQDIAHKIRETLAQLPKEKPLWSVCWGDAHCGNVHFTEDHQLTLFDFDQCGYGWRAFE CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCCCCCEEHH IGKFFQGALTTGLQRRVREAFIAGYESQTTFVAQEQAALQALTQLAYIWSWRISLTSIQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEEE FNNSQLDRHYLTQRLERLKALSSRDWQLF ECCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVCSDFPVIYSTLSAIALRERVLPQYGLKTVSQCELWNRGLSDIYFVQAAQDTFVLRVSH CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECC HHWRSPTEIFFELDFLNFLKAQGLPVAAPLPTEAGEWAVKIQAPEGDRYATLFPFAPGEI CCCCCCHHEEEEEHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCCE ALGGWNESQSRHLGAVVAQIHQVSQDFICDHPRKPLDLEYLLDESLGVILPFFGDRPRDW EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCC GFMQDIAHKIRETLAQLPKEKPLWSVCWGDAHCGNVHFTEDHQLTLFDFDQCGYGWRAFE CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCCCCCEEHH IGKFFQGALTTGLQRRVREAFIAGYESQTTFVAQEQAALQALTQLAYIWSWRISLTSIQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEEE FNNSQLDRHYLTQRLERLKALSSRDWQLF ECCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]