| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is rpmG
Identifier: 170077197
GI number: 170077197
Start: 597623
End: 597817
Strand: Direct
Name: rpmG
Synonym: SYNPCC7002_A0572
Alternate gene names: 170077197
Gene position: 597623-597817 (Clockwise)
Preceding gene: 170077196
Following gene: 170077198
Centisome position: 19.87
GC content: 51.28
Gene sequence:
>195_bases ATGGCAAGCAAAAAAGGCGTCCGCATTACCATCACCGTGGAATGCACCGAATGTCGCACCAATACCAACAAGCGCTCCAA TGGCGTTTCCCGCTATACCACTAGCAAAAACCGTCGGAACACCACCGGGCGGCTCGAAATCAAAAAATTCTGCCCCCACT GCAACGCGCACACTGTCCACAAAGAAATTAAGTAG
Upstream 100 bases:
>100_bases CGTCTCAAACAAATCCTTGCCGAGCTAAGACAAAATATGCAAAAATAGAAATTTGTGTGTAAACCTTAGCGATCCACAAC CGCTAATCTAGTAAAAAATT
Downstream 100 bases:
>100_bases GTAATTCCTTTACCACTGAAATTTTATCGACAAATTTTTTATTTTTTAACGTTATTTATTAACCATGGCCTACTACCGTA AACGTCTTTCTCCGATTCCT
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MASKKGVRITITVECTECRTNTNKRSNGVSRYTTSKNRRNTTGRLEIKKFCPHCNAHTVHKEIK
Sequences:
>Translated_64_residues MASKKGVRITITVECTECRTNTNKRSNGVSRYTTSKNRRNTTGRLEIKKFCPHCNAHTVHKEIK >Mature_63_residues ASKKGVRITITVECTECRTNTNKRSNGVSRYTTSKNRRNTTGRLEIKKFCPHCNAHTVHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL33_SYNP2 (B1XPV1)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001733835.1 - ProteinModelPortal: B1XPV1 - SMR: B1XPV1 - GeneID: 6055689 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A0572 - HOGENOM: HBG751058 - OMA: RIVITLE - ProtClustDB: PRK00504 - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 7336; Mature: 7204
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKKGVRITITVECTECRTNTNKRSNGVSRYTTSKNRRNTTGRLEIKKFCPHCNAHTVH CCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEHHCCCCCCCCCCC KEIK CCCC >Mature Secondary Structure ASKKGVRITITVECTECRTNTNKRSNGVSRYTTSKNRRNTTGRLEIKKFCPHCNAHTVH CCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEHHCCCCCCCCCCC KEIK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA