| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077098
Identifier: 170077098
GI number: 170077098
Start: 503678
End: 503992
Strand: Direct
Name: 170077098
Synonym: SYNPCC7002_A0472
Alternate gene names: NA
Gene position: 503678-503992 (Clockwise)
Preceding gene: 170077097
Following gene: 170077099
Centisome position: 16.74
GC content: 48.89
Gene sequence:
>315_bases ATGACTCAGCAAGCCATTAAGCTCGTCATCGTTACGGAAAAATTATTACTCAAAAAAATCGCCAAAATTATCGATGGTGT TGGAGCAACAGGTTACACGGTGGTGCCCGCCGGCGGTAAAGGGAGCCGCAACGTGCGCTCATCGGGACAGCCCAACGTCT CTGACACTTCCTCGAATGTAAAAATTGAGGTACTGACCGCTAGTCGAGAGATGGCTCTAAAGATTTCGGATGAGGTTGCC GCCCAGTTTTTCGATGACTATTCAGGGATCACTTACATCTGCGACGCGGAGGTACTGTACGCGCACAAATTTTAG
Upstream 100 bases:
>100_bases CATAGAGTCTTGTCTTTGATTGTCGCAACCCATATTTTTAATAGAAAAGCGACAATTTTTTTTCGACTCGCCATACATCA CGCGTCAAGAGGAACCCCCC
Downstream 100 bases:
>100_bases GCTAACTTCCCAAGTGCTGAATATTGCAGAAAACCCTGTCAGTCACAGCTAGTCGTTCCCTCATCAAACGTCATCACCAC AGTCAAGCCCTCTACAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTQQAIKLVIVTEKLLLKKIAKIIDGVGATGYTVVPAGGKGSRNVRSSGQPNVSDTSSNVKIEVLTASREMALKISDEVA AQFFDDYSGITYICDAEVLYAHKF
Sequences:
>Translated_104_residues MTQQAIKLVIVTEKLLLKKIAKIIDGVGATGYTVVPAGGKGSRNVRSSGQPNVSDTSSNVKIEVLTASREMALKISDEVA AQFFDDYSGITYICDAEVLYAHKF >Mature_103_residues TQQAIKLVIVTEKLLLKKIAKIIDGVGATGYTVVPAGGKGSRNVRSSGQPNVSDTSSNVKIEVLTASREMALKISDEVAA QFFDDYSGITYICDAEVLYAHKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable). Cell membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011322 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11182; Mature: 11051
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQAIKLVIVTEKLLLKKIAKIIDGVGATGYTVVPAGGKGSRNVRSSGQPNVSDTSSNV CCCHHEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCE KIEVLTASREMALKISDEVAAQFFDDYSGITYICDAEVLYAHKF EEEEEECCCEEEEEECHHHHHHHHHCCCCEEEEECCEEEEEECC >Mature Secondary Structure TQQAIKLVIVTEKLLLKKIAKIIDGVGATGYTVVPAGGKGSRNVRSSGQPNVSDTSSNV CCHHEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCE KIEVLTASREMALKISDEVAAQFFDDYSGITYICDAEVLYAHKF EEEEEECCCEEEEEECHHHHHHHHHCCCCEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]