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The map label for this gene is yicJ [C]

Identifier: 170077086

GI number: 170077086

Start: 490081

End: 491697

Strand: Direct

Name: yicJ [C]

Synonym: SYNPCC7002_A0460

Alternate gene names: 170077086

Gene position: 490081-491697 (Clockwise)

Preceding gene: 170077084

Following gene: 170077087

Centisome position: 16.29

GC content: 51.89

Gene sequence:

>1617_bases
ATGACCCAGCCGTTCCATCCCCCATCAGAAAAACTCAACCTATCGACAAAAATTGCCTTTGGGGCGGGCGATATTGGGCC
AGCTCTCACGGCAAATGTCTTGGTTTTCTTTCTGTTGTACTTTTTTACCCAGGTAGCGGGTTTACCACCGGGCCTGGCGG
GGAGCATCTTGATGATCGGCAAAATTTCCGACGCCATCAATGATCCGATTGTGGGGGTATGGAGCGATCGCACTCGTCAT
CCCTGGGGCCGACGCTTGCCCTGGATGCTGGGGGGAATTATTCCCTTTGTCTTTGTCTTTTTTGGGCAGTGGTTGGTTCC
CCAATTGAGCGAAATTGATCAAGTGAATGATTGGTTTTTGTTTGGCTACTACATTGTGATGGGCATTTTATTTAACCTGG
CCTACACAGCGGTTAATTTGCCCTACGCGGCCCTCACCCCAGAGTTAACCCAGGATTACCACGAACGCACCAGTCTCAAC
AGTTTTCGGTTTAGTTTTTCCATTGGCTCTAGTATTTTTTCGCTGATTGTGGCGCGGTTGATCTTCCAAGCTTATCCGGA
TGATCCCCTAAAGCAGTACAGCCTTCTGGGGCTCGTTTGTTCAGTGTTTGCGGGCTTGGCGCTGTTGTGGTGTACGTTGC
GGCTCCAAGAGAAGGGGCGATCGCCAATCCTAAACCCTCGGCAACGGCAGCGATTGGGTCAAGGGTTATGGGGAATGGCT
GGGGTGAGTGGCCTGGCTGGGTTGGGGTTGCTCCAGGGGCCAATTTTATGGCCATTTTTGTTTATTTCTGCGGGGCTATT
GCTGGCGGTGGCGGGTTGGACATTCGTGCGCTCTGTGCCGGAACCCCATTTAACAGTACCTTTGGCTGAACAAACGGATC
TTGCGGCCCCGATTCCCTTCCGGGAGCAACTGAAAATTGCCTTTAGTAACAAACCCTTTCTCTTCGTGATTGGGATCTAT
CTGGCCTCTTGGCTGGCGATTCAATTAACCGCTTCGATCTTGCCCTATTTCGTGATCAACTGGATGGGCCTACCAGATGC
GATGTTTCCCAATGTGGCTCTGGCGGTACAGGGAACAGCCCTGGTGCTTTTATTTGTGGCCAGCGCCCTCAGTCAACACT
TAGGGAAAAAAACGGTGTATTTTGGGGGCGTTTTCCTGTGGATTATTGCCCAGGTGGGGTTATTTTTCCTACAACCGGGA
CAAATCGGTTTAATGTTTGCCTGTGCAATCTTGGCTGGCTGTGGGGTGTCCGTGAGCTATCTGATCCCCTGGTCGATGGT
GCCCGATGTGATTGAACTAGATGAACTCACCACCGGACAACGGCGGGAAGGCGTTTTTTATGGCTTTATGGTGCTCCTCC
AGAAAATAGGTCTGGCTATTAGCTTATTTCTGGTGGGTCAAGCCTTGGCCTGGGCTGGTTTCGTTGAATCTGTTCCGGGT
CAAGCGCCCCCGGTGCAACCTGATTCGGCTCTCTTGGCGATCCGCTTGGCGATCGCCCCCTTACCGACCATCGCGCTTAT
CATTGGCTTAGGACTCGCTTACTTTTATCCCATCACCCAGCAGTACCACGAAGAAATTCGTCTCAAACTCGCTGAACGAC
GCGTTGATCAAGCCTAG

Upstream 100 bases:

>100_bases
ATTTTACATTCCCCGTTTCTGAGTTGGCGATCGCCGATTACCGTAGCAGCCACTACAATTGCAAGCAGTTTCTTTGCGCC
CCCAAGCGGGCGTCCCTGCC

Downstream 100 bases:

>100_bases
TTGCAGTGGCGATCGCCCCACAAAGTGCATCAGTAAATAGGCAGCACAACTAAGACTGGGCAACACACAAAAATTCCCAC
TTAAAATCAAGAGCCATGAC

Product: putative sodium/sugar (melibiose) symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MTQPFHPPSEKLNLSTKIAFGAGDIGPALTANVLVFFLLYFFTQVAGLPPGLAGSILMIGKISDAINDPIVGVWSDRTRH
PWGRRLPWMLGGIIPFVFVFFGQWLVPQLSEIDQVNDWFLFGYYIVMGILFNLAYTAVNLPYAALTPELTQDYHERTSLN
SFRFSFSIGSSIFSLIVARLIFQAYPDDPLKQYSLLGLVCSVFAGLALLWCTLRLQEKGRSPILNPRQRQRLGQGLWGMA
GVSGLAGLGLLQGPILWPFLFISAGLLLAVAGWTFVRSVPEPHLTVPLAEQTDLAAPIPFREQLKIAFSNKPFLFVIGIY
LASWLAIQLTASILPYFVINWMGLPDAMFPNVALAVQGTALVLLFVASALSQHLGKKTVYFGGVFLWIIAQVGLFFLQPG
QIGLMFACAILAGCGVSVSYLIPWSMVPDVIELDELTTGQRREGVFYGFMVLLQKIGLAISLFLVGQALAWAGFVESVPG
QAPPVQPDSALLAIRLAIAPLPTIALIIGLGLAYFYPITQQYHEEIRLKLAERRVDQA

Sequences:

>Translated_538_residues
MTQPFHPPSEKLNLSTKIAFGAGDIGPALTANVLVFFLLYFFTQVAGLPPGLAGSILMIGKISDAINDPIVGVWSDRTRH
PWGRRLPWMLGGIIPFVFVFFGQWLVPQLSEIDQVNDWFLFGYYIVMGILFNLAYTAVNLPYAALTPELTQDYHERTSLN
SFRFSFSIGSSIFSLIVARLIFQAYPDDPLKQYSLLGLVCSVFAGLALLWCTLRLQEKGRSPILNPRQRQRLGQGLWGMA
GVSGLAGLGLLQGPILWPFLFISAGLLLAVAGWTFVRSVPEPHLTVPLAEQTDLAAPIPFREQLKIAFSNKPFLFVIGIY
LASWLAIQLTASILPYFVINWMGLPDAMFPNVALAVQGTALVLLFVASALSQHLGKKTVYFGGVFLWIIAQVGLFFLQPG
QIGLMFACAILAGCGVSVSYLIPWSMVPDVIELDELTTGQRREGVFYGFMVLLQKIGLAISLFLVGQALAWAGFVESVPG
QAPPVQPDSALLAIRLAIAPLPTIALIIGLGLAYFYPITQQYHEEIRLKLAERRVDQA
>Mature_537_residues
TQPFHPPSEKLNLSTKIAFGAGDIGPALTANVLVFFLLYFFTQVAGLPPGLAGSILMIGKISDAINDPIVGVWSDRTRHP
WGRRLPWMLGGIIPFVFVFFGQWLVPQLSEIDQVNDWFLFGYYIVMGILFNLAYTAVNLPYAALTPELTQDYHERTSLNS
FRFSFSIGSSIFSLIVARLIFQAYPDDPLKQYSLLGLVCSVFAGLALLWCTLRLQEKGRSPILNPRQRQRLGQGLWGMAG
VSGLAGLGLLQGPILWPFLFISAGLLLAVAGWTFVRSVPEPHLTVPLAEQTDLAAPIPFREQLKIAFSNKPFLFVIGIYL
ASWLAIQLTASILPYFVINWMGLPDAMFPNVALAVQGTALVLLFVASALSQHLGKKTVYFGGVFLWIIAQVGLFFLQPGQ
IGLMFACAILAGCGVSVSYLIPWSMVPDVIELDELTTGQRREGVFYGFMVLLQKIGLAISLFLVGQALAWAGFVESVPGQ
APPVQPDSALLAIRLAIAPLPTIALIIGLGLAYFYPITQQYHEEIRLKLAERRVDQA

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI42713696, Length=540, Percent_Identity=25.1851851851852, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI211063479, Length=553, Percent_Identity=24.5931283905967, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI122937339, Length=173, Percent_Identity=28.3236994219653, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI111378391, Length=463, Percent_Identity=22.2462203023758, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI111378395, Length=463, Percent_Identity=22.2462203023758, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI111378386, Length=463, Percent_Identity=22.2462203023758, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI87082306, Length=232, Percent_Identity=30.1724137931034, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1786466, Length=162, Percent_Identity=34.5679012345679, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790561, Length=149, Percent_Identity=32.8859060402685, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI48994989, Length=219, Percent_Identity=25.5707762557078, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI145693206, Length=179, Percent_Identity=26.2569832402235, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787902, Length=337, Percent_Identity=24.3323442136499, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567067, Length=170, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59094; Mature: 58962

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00872 NA_GALACTOSIDE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPFHPPSEKLNLSTKIAFGAGDIGPALTANVLVFFLLYFFTQVAGLPPGLAGSILMIG
CCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
KISDAINDPIVGVWSDRTRHPWGRRLPWMLGGIIPFVFVFFGQWLVPQLSEIDQVNDWFL
EHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGYYIVMGILFNLAYTAVNLPYAALTPELTQDYHERTSLNSFRFSFSIGSSIFSLIVARL
HHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
IFQAYPDDPLKQYSLLGLVCSVFAGLALLWCTLRLQEKGRSPILNPRQRQRLGQGLWGMA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHH
GVSGLAGLGLLQGPILWPFLFISAGLLLAVAGWTFVRSVPEPHLTVPLAEQTDLAAPIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCH
REQLKIAFSNKPFLFVIGIYLASWLAIQLTASILPYFVINWMGLPDAMFPNVALAVQGTA
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECHHH
LVLLFVASALSQHLGKKTVYFGGVFLWIIAQVGLFFLQPGQIGLMFACAILAGCGVSVSY
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCE
LIPWSMVPDVIELDELTTGQRREGVFYGFMVLLQKIGLAISLFLVGQALAWAGFVESVPG
ECCHHHCCCHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QAPPVQPDSALLAIRLAIAPLPTIALIIGLGLAYFYPITQQYHEEIRLKLAERRVDQA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQPFHPPSEKLNLSTKIAFGAGDIGPALTANVLVFFLLYFFTQVAGLPPGLAGSILMIG
CCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
KISDAINDPIVGVWSDRTRHPWGRRLPWMLGGIIPFVFVFFGQWLVPQLSEIDQVNDWFL
EHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGYYIVMGILFNLAYTAVNLPYAALTPELTQDYHERTSLNSFRFSFSIGSSIFSLIVARL
HHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
IFQAYPDDPLKQYSLLGLVCSVFAGLALLWCTLRLQEKGRSPILNPRQRQRLGQGLWGMA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHH
GVSGLAGLGLLQGPILWPFLFISAGLLLAVAGWTFVRSVPEPHLTVPLAEQTDLAAPIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCH
REQLKIAFSNKPFLFVIGIYLASWLAIQLTASILPYFVINWMGLPDAMFPNVALAVQGTA
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECHHH
LVLLFVASALSQHLGKKTVYFGGVFLWIIAQVGLFFLQPGQIGLMFACAILAGCGVSVSY
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCE
LIPWSMVPDVIELDELTTGQRREGVFYGFMVLLQKIGLAISLFLVGQALAWAGFVESVPG
ECCHHHCCCHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QAPPVQPDSALLAIRLAIAPLPTIALIIGLGLAYFYPITQQYHEEIRLKLAERRVDQA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]